Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01222 ATGCTTTTCTCGCCGGCACTCGACGACGCCAAGCACTGCTTCTCTCGGCCGGAGATGTACAAGGAAAACCTCGCCAGCACCTTGGAGGCCTACAACCACCACGAGTTCCTCTGCTACAAGAGCCACCTCGCCTGGCCGCCGCGCCTCGAGGCCTTCGACGCCGATCCTCTTCCCCTATGTGTCGCCACCGTCTGGAGAGCTCGCAAAAACGACATCGCCGTCAAGATGAAAATCACGATCACTCCCACTAGAGTGGAGACACTTGATGTTATTGACCTTCGTAAGCAGCAGAGGAAGGAACCTAAAAAGCCTCTTTATCAAGTACTTGAAGAGAAGAAGGAAAAAATTGCTCCAGGAACTTTGCTTGGAACTACACACACTTATGTGGTTAACACTGGCACCCAGGACAAGTCAGGGGCTAAAAGGATTGATTTACTTAGAGGACAAAAGTCACATAAAGTAGATGTCACTTTACTGCCACAAGAGTTGGATGCCATGGAAAATTATGAAGAAGCAAGGGAGGAAAAGAAGTTACGAAATCAGTGTGAGGATTCCAGTGACATGGTGGCAGAGGCTCGAAGGGAAAAGATTAGTGAAAGGATGAAAATTCTTCAAGATTTGGTCCCTGGTTTTAATAAGAGATTCCTTCCGTCAAATTTTCGGGTGGAAGAGGATAGAGTAAACCCTCTTCCTCCGTTTCAAGCTGTTCTCGATAAGAAAAGAAAAATTAGAAGGAAAATTGAAGCAGTTGGGATCCCTTATACCTTTGTCTCTGCAAATTGTTTTGGTGCATACTTTGTTAATTATTTGCTTCGTTCTTATGAGAAAAAGAACAATATTACTGTCTATGGCAACAGTGATACCAAAGCCTTACCCCCTCCACACAATATTCCAGTTCCCATTCTTCATAGTGTATTTGTTAGAGGGGACCTCGTGAACTTTGAGCTACGGGAAAATGACCTTGAAGCTTCAAGCCTATATCCTGATTATAACTACACATCAATTCATAAACTTCTTGATATATTTCTTGCTAATCCTCCAACCCCTGCCTCTGCTGCTTTTGAGTGA 1068 0.4448 MLFSPALDDAKHCFSRPEMYKENLASTLEAYNHHEFLCYKSHLAWPPRLEAFDADPLPLCVATVWRARKNDIAVKMKITITPTRVETLDVIDLRKQQRKEPKKPLYQVLEEKKEKIAPGTLLGTTHTYVVNTGTQDKSGAKRIDLLRGQKSHKVDVTLLPQELDAMENYEEAREEKKLRNQCEDSSDMVAEARREKISERMKILQDLVPGFNKRFLPSNFRVEEDRVNPLPPFQAVLDKKRKIRRKIEAVGIPYTFVSANCFGAYFVNYLLRSYEKKNNITVYGNSDTKALPPPHNIPVPILHSVFVRGDLVNFELRENDLEASSLYPDYNYTSIHKLLDIFLANPPTPASAAFE 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01222 355 Gene3D - 174 258 - -
Gma04g01222 355 Pfam NmrA-like family 212 293 IPR008030 -
Gma04g01222 355 PANTHER PHENYLCOUMARAN BENZYLIC ETHER REDUCTASE-LIKE PROTEIN 289 355 - -
Gma04g01222 355 PANTHER PINORESINOL REDUCTASE-RELATED 126 291 - -
Gma04g01222 355 PANTHER PHENYLCOUMARAN BENZYLIC ETHER REDUCTASE-LIKE PROTEIN 126 291 - -
Gma04g01222 355 Coils Coil 175 195 - -
Gma04g01222 355 Gene3D - 259 289 - -
Gma04g01222 355 Gene3D - 290 355 - -
Gma04g01222 355 PANTHER PINORESINOL REDUCTASE-RELATED 289 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01222 Gma-Chr4 18249382 18256685 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01222 161 213 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 52.830 1.86e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01222 K12829 - gsj:114410634 249.595