Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01216 atgactgacgatgtccctgatctggctgcggaggcacctgagatgcgtgcgaacgtacatggtgctgatggtgctgaggggtcagatgctgatgatgctgctgagggattccctggtgggccacgtgacccgtcagtactggcatcatttgcggaccatgttgcacatgctgtttggagtggacaagaacgtcctgatttgaagttggtgtcacatgggaggaaggtgacactgattgggaggccagtgcctgagattgaaggactgAAAACACTCAACTCGCGTTCCAGTTTCTCTCTGCGCGGGTTTCTGCTCCACTCCGTCACAAATGGCCTCCGAAAAGAAACTGGCGAACCCAATGCGAGAAATCAAAGTCCAGAAACTCGTCCTCAACATCTCCGTCGGCGAGAGCGGGGATCGTCTCACCCGCGCCGCCAAGGTGCTCGAACAACTCAGTGGCCAAACCCCTGTTTTCTCCAAAGGAGGAACGAGAAGATCGCGTGTCATGTGACAGTGAGAGGGGACAAGGCGATGCAGCTTCTGGAGAGTGGCTTGAAGGTGAAGGAGTATGAATTGCTCAGGAGGAACTTCAGCGACACCGGCTGCTTCGGATTTGGCATTCAGGAGCACATTGATTTGGGAATCAAGTATGATCCTTCGACTGGCATTTACGGAATGGATTTCTTTGTCGTTCTGGAGCGCCCTGGCTACCGTGTGGGACGACGCTGTCGGTGCAAGGCTCGTGTTAGAATTCAGCATCGTGTCACGAAGGAGGATGCCATGAAGTGGTTCCAAGTTAAATACGAAGGTGTCATCCTAAACAAGTCCCAAGCACTCGTTTAA 843 0.3559 MTDDVPDLAAEAPEMRANVHGADGAEGSDADDAAEGFPGGPRDPSVLASFADHVAHAVWSGQERPDLKLVSHGRKVTLIGRPVPEIEGLKTLNSRSSFSLRGFLLHSVTNGLRKETGEPNARNQSPETRPQHLRRRERGSSHPRRQGARTTQWPNPCFLQRRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRCRCKARVRIQHRVTKEDAMKWFQVKYEGVILNKSQALV 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01216 280 MobiDBLite consensus disorder prediction 113 127 - -
Gma04g01216 280 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 158 279 IPR002132 GO:0003735|GO:0005840|GO:0006412
Gma04g01216 280 MobiDBLite consensus disorder prediction 113 154 - -
Gma04g01216 280 Pfam ribosomal L5P family C-terminus 165 263 IPR031309 -
Gma04g01216 280 SUPERFAMILY RL5-like 155 272 IPR022803 -
Gma04g01216 280 Gene3D - 152 276 IPR022803 -
Gma04g01216 280 PANTHER 60S RIBOSOMAL PROTEIN L11-1 158 279 - -
Gma04g01216 280 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01216 Gma-Chr4 18020294 18029933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01216 158 279 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 90.984 3.71e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01216 K02868 - gmx:100305912 237.654