Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01213 ATGAAGAAGATAGCAAATGGTGAAGATGAAGATTCCTCTGAATCTGAATCTGATGATGATTCAAGTGAAGATCAGGAGGAGGGAGACGATGAATCTGATGAGGAGACACCCAAGAAGATTGAAGCAAGCAATAACACGGGTATTGACTCTTCTAAGAAAACACTTGTTTCTGTGAAGAAGACAAAATTTGTTACTCCTCAGAAGACTAATAGCAAGAATGTTGGCTATGTTGCAACTCCTCACCCTTCCAAGCAGACTGGTAAACCAACTCTGCTAATAACAAGCAGCAGACTCCGAAGTCAGGAGATTACAGCTGCAACCCTTACAACAGCAGATGCCTTAAGTTCTCATAACAATGTCAAGCACAGCGCTAACTGA 378 0.418 MKKIANGEDEDSSESESDDDSSEDQEEGDDESDEETPKKIEASNNTGIDSSKKTLVSVKKTKFVTPQKTNSKNVGYVATPHPSKQTGKPTLLITSSRLRSQEITAATLTTADALSSHNNVKHSAN 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01213 125 MobiDBLite consensus disorder prediction 11 34 - -
Gma04g01213 125 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 8 118 - -
Gma04g01213 125 MobiDBLite consensus disorder prediction 41 89 - -
Gma04g01213 125 MobiDBLite consensus disorder prediction 1 89 - -
Gma04g01213 125 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 8 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01213 Gma-Chr4 17997272 17998707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01213 51 124 C2H2 Transcription Factor Family AT5G03740 42.529 4.03e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01213 - - gmx:100812152 115.546