Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01208 ATGGGTTCTAATAGGCCACTTCTAATGACAGTACCATCTCCAACAACAACTTCTAGCACCTCTATTGATCCTGAGCTTCCAAAATCAAAGTCAAGTTCCAGCAATAACGCCTTCAACCCTTTTGAGAACACTCTCAACAACTCATCATCATCACGCAGAAGTTCTGGGAGCAGGAGCAACAACTCTATCCATGAAGTGAGTTTGAGCAGTTCAGGGTCCATTAAATCCAAACCTGTGAGGTATGGCTCAAAGGGTGGTGCAGATTCTGAAGGACTCAGCATGTCACAAAGGGAGCTCAGAGATGAGGATGCAAGGTTAGTGTACATAAACGAACCTTTCAAAACAAACGAGGCTTTTGAGTTTGCAGCGAACTCAATCCGCACAAGCAAATACTCCCTCCTCACTTTCATTCCAAGGAACCTCTTTGAACAATTCCACAGGGTTGCTTACGTGTACTTCCTCATAATTGCAATTCTCAACCAACTTCCTCAGCTTGCAGTGTTTGGAAGAACTGTTTCCATCTTGCCACTGGCCTTTGTGCTGTTTGTCACAGCTGTGAAGGATGTGTATGAGGATTGGAGAAGGCACCAGAATGATAAAGTTGAGAACAATAGGTTAGCATCAGTTATGGTTGATGGAGGAAGAAGCTTTGTGGAGAAAAAATGGAGGGATGTTAGAGTTGGTGAGGTGATAAAGATCAAGGCAAATGAGACTATCCCTTGTGATACTGTGTTGCTCTCAACTAGTGATCCAACTGGAGTTGCATATGTGCAGACTATTAATCTTGATGGTGAGTCCAATTTGAAGACAAGGTATGCAAAGCAAGAGACACATGGTAAGGAGGGGTTTGGTGGGGTGATTAAGTGTGAGAAACCCAATAGGAACATTTATGGATTTCTTGCTAACATGGAAGTTGATGGCAAGAAGTTGTCTCTTGGGTCCTCTAATATTGTGCTTAGAGGATGTGAACTCAAGAATACTAGTTGGGCTATTGGTGTTGCTGTGTATTGTGGGAGTGAGACCAAGGCTATGCTGAATAACTCAGGAGCTCCTTCTAAGAGGAGCCGGTTGGAGACATGCATGAATTCTGAGATCATTTGGCTCTCTTTCTTCCTTGTGGCATTGTGTACAGTCACCTCAGTTTGTGTTGCGGTGTGGCTGAAGCGCCACAAGGATGAGTTGAATCTGTTGCCTTATTATAGGAAACTTGACTTTTCAGAAGGGGATGTGGATAGCTATGAGTACTATGGATGGGGGTTGGAAATTTTCTTCACATTTCTCATGTCAGTTATAGTGTTCCAAGTGATGATTCCCATTTCCTTGTACATTTCCATGGAGCTTGTGAGGGTTGGTCAAGCCTACTTTATGTTCCAAGACAAGAGAATGTATGATGAGGCAACAAAGTCAAGGTTTCAGTGCAGGGCTTTGAACATTAATGAAGATTTGGGGCAGATTAAGTATGTTTTCTCAGACAAAACCGGCACTCTCACTCAGAACAAGATGGAGTTTCAATGTGCAAGCATCTGGGGGGTTGATTACAGTTCTAAAGAGAACAACAGCATGGAGAGGGATGAGGTAGTTGAACATTCTGTGAAAGTGGATGGAAAGGTCTTCAGACCAAAAATGAAGGTGAAAGTCAATCCAGAGCTTTTGCAGCTATCAAGAAGTGGACTTCAAAATGTGGAGGGAAAACGGATTCATGATTTCTTTCTAGCAATGGCAACCTGCAACACTATTGTGCCTCTTGTTGTTGACACACCAGACCCTGATGTCAAGCTGATAGATTACCAAGGAGAATCTCCAGATGAACAAGCATTAGCTTATGCTGCCGCCGCCTATGGTTTTATGCTCACAGAAAGAACCTCTGGCCATATAGTCATTGATATTCATGGACAAAGACAAAAGTTCAATGTCTTGGGTTTACATGAATTTGACAGTGACAGGAAGAGAATGTCAGTTATATTGGGGTACCCTGACAATTCTGTGAAAGTTTTTGTCAAAGGAGCAGACACATCCATGCTTAATGTGATAGACAAGTCATTTAAAATGGACTTAGTAAGAGCCACTGAAGCACATCTTCACTCTTACTCTTCTATGGGTTTGAGGACACTTGTTATTGGCATGAGAGACTTGAATGCTTCAGAATTTGAGCAATGGCATGGATCCTTTGAGGCAGCAAGCACTGCTGTGTTTGGCAGGGCTGTGATGCTTCACAAGGTTTCGAGCATTGTAGAAAACAATCTCACCATATTGGGAGCATCTGCCATTGAAGATAAGCTGCAACAATGTGTGCCTGAATCCATTGAGTCTCTAAGGATTGCAGGCATTAAAGTATGGGTTCTGACTGGGGACAAACAAGAAACTGCCATATCCATTGGCTACTCCTCAAAGCTCCTAACAAGCAACATGACTCAGATTATAATCAATAGCAAGAACAGAGAATCATGCAGAAAAAGTTTACAAGATGCCCTTGTCATGTCTAAAAAGCTCATGTCCACATCCGATGTTGCAAACAATGCTGGAGGAAGTTCACATGCAACTCCAGTAGCCTTGATTATCGATGGTACCAGCCTTGTGCATATTCTTGACAGTGAACTTGAAGAACAGCTATTTCAACTTGCAAGTAGATGTTCTGTTGTTCTATGTTGCCGAGTTGCTCCGCTGCAAAAGGCAGGGATTGTTGCCCTTGTGAAGAATAGGACATCTGACTTGACACTAGCTATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAAGAGGGTCGGCAAGCTGTAATGGCATCTGATTTTGCAATGGGGCAGTTTAGGTTTTTAGTTCCTCTTTTATTGATACATGGTCACTGGAATTACCAACGGCTCGGTTATATGATACTATACAATTTTTACAGAAATGCTGTCCTTGTTCTTGTCCTATTTTGGTATGTGCTCTACACTGCCTTCACTTTGACAACTGCTATAAATGAATGGAGCTCCACGTTATACTCAATAATCTACAGTTCATTGCCAACTATAATTGTTGGTATTCTCGACAAGGATGTTGGTAAAAGGACTCTCCTAAAGTACCCTCAACTTTATGGGGCAGGACAGAGACATGTGGCCTACAACAAGAAATTATTTTTGTTAACAATGTTAGATACTTTGTGGCAAAGCATGGTTATCTTCTGGGCACCCCTCTTTGCATATTGGAGTAGCACAGTTGATGTGGCAAGCATTGGAGACCTTTGGACTTTAGGAGTTGTTATTTTGGTTAATTTACACTTGGCCATGGATGTCATTAGGTGGTATTGGGTGACCCATGCTGTCATTTGGGGGTCTATAGTTGCAACTTTCATTAGTGTCATGATCATTGATGCTATCCCCAATCTTCCTGGCTACTGGGCCTTCTTTGATGCTGCAGGAACTGGATTGTTCTGGTTATTGTTGCTTGGAATCATAGTGGCAGCATTGCTTCCACGTTTGGTTGTAAGATTTGTTTATCAATATTATTTTCCTAATGATATTCAAATTTGTAGAGAAGCTGAGAAGATTGGGTATGAGAGAGTTGTTGAAAGTGGACACATAGAAATGCTTCCTATCTAA 3612 0.4214 MGSNRPLLMTVPSPTTTSSTSIDPELPKSKSSSSNNAFNPFENTLNNSSSSRRSSGSRSNNSIHEVSLSSSGSIKSKPVRYGSKGGADSEGLSMSQRELRDEDARLVYINEPFKTNEAFEFAANSIRTSKYSLLTFIPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGRTVSILPLAFVLFVTAVKDVYEDWRRHQNDKVENNRLASVMVDGGRSFVEKKWRDVRVGEVIKIKANETIPCDTVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETHGKEGFGGVIKCEKPNRNIYGFLANMEVDGKKLSLGSSNIVLRGCELKNTSWAIGVAVYCGSETKAMLNNSGAPSKRSRLETCMNSEIIWLSFFLVALCTVTSVCVAVWLKRHKDELNLLPYYRKLDFSEGDVDSYEYYGWGLEIFFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMFQDKRMYDEATKSRFQCRALNINEDLGQIKYVFSDKTGTLTQNKMEFQCASIWGVDYSSKENNSMERDEVVEHSVKVDGKVFRPKMKVKVNPELLQLSRSGLQNVEGKRIHDFFLAMATCNTIVPLVVDTPDPDVKLIDYQGESPDEQALAYAAAAYGFMLTERTSGHIVIDIHGQRQKFNVLGLHEFDSDRKRMSVILGYPDNSVKVFVKGADTSMLNVIDKSFKMDLVRATEAHLHSYSSMGLRTLVIGMRDLNASEFEQWHGSFEAASTAVFGRAVMLHKVSSIVENNLTILGASAIEDKLQQCVPESIESLRIAGIKVWVLTGDKQETAISIGYSSKLLTSNMTQIIINSKNRESCRKSLQDALVMSKKLMSTSDVANNAGGSSHATPVALIIDGTSLVHILDSELEEQLFQLASRCSVVLCCRVAPLQKAGIVALVKNRTSDLTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLYTAFTLTTAINEWSSTLYSIIYSSLPTIIVGILDKDVGKRTLLKYPQLYGAGQRHVAYNKKLFLLTMLDTLWQSMVIFWAPLFAYWSSTVDVASIGDLWTLGVVILVNLHLAMDVIRWYWVTHAVIWGSIVATFISVMIIDAIPNLPGYWAFFDAAGTGLFWLLLLGIIVAALLPRLVVRFVYQYYFPNDIQICREAEKIGYERVVESGHIEMLPI 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01208 1203 ProSitePatterns E1-E2 ATPases phosphorylation site. 491 497 IPR018303 -
Gma04g01208 1203 Pfam Cation transport ATPase (P-type) 595 674 - -
Gma04g01208 1203 SFLD Haloacid Dehalogenase 473 959 - -
Gma04g01208 1203 PRINTS Sodium/potassium-transporting ATPase signature 482 503 - -
Gma04g01208 1203 PRINTS Sodium/potassium-transporting ATPase signature 985 1005 - -
Gma04g01208 1203 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 879 994 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma04g01208 1203 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 421 510 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma04g01208 1203 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 121 1183 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gma04g01208 1203 CDD P-type_ATPase_APLT_Dnf-like 124 1068 - -
Gma04g01208 1203 MobiDBLite consensus disorder prediction 1 77 - -
Gma04g01208 1203 Pfam Phospholipid-translocating ATPase N-terminal 107 173 IPR032631 -
Gma04g01208 1203 SUPERFAMILY Calcium ATPase, transmembrane domain M 121 1175 IPR023298 -
Gma04g01208 1203 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 16 1203 - -
Gma04g01208 1203 Gene3D - 595 728 IPR023299 GO:0000166
Gma04g01208 1203 SUPERFAMILY Calcium ATPase, transduction domain A 211 343 IPR008250 -
Gma04g01208 1203 SFLD p-type atpase 473 959 IPR044492 -
Gma04g01208 1203 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 495 759 IPR023299 GO:0000166
Gma04g01208 1203 Pfam Phospholipid-translocating P-type ATPase C-terminal 936 1176 IPR032630 -
Gma04g01208 1203 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 16 1203 - -
Gma04g01208 1203 SUPERFAMILY HAD-like 484 963 IPR036412 -
Gma04g01208 1203 MobiDBLite consensus disorder prediction 1 96 - -
Gma04g01208 1203 Gene3D - 747 948 IPR023214 -
Gma04g01208 1203 PRINTS P-type cation-transporting ATPase superfamily signature 489 503 - -
Gma04g01208 1203 PRINTS P-type cation-transporting ATPase superfamily signature 908 927 - -
Gma04g01208 1203 Gene3D - 182 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01208 Gma-Chr4 17847392 17852784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01208 50 1200 Primary Pumps ATPases AT5G04930 67.561 0.0 1644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01208 K14802 - gmx:100813982 2310.41