Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01200 ATGAGCTCCATTTTCTTCTTCCTCCACTCTTACCCCTACTCCGCCGAGGAGATCCACCAAGCCTACAACCACACCTGCTCCACAGCCACCAAGAACGGCCTCCAGGTCCTCCACTACTCCCACCACCACACCTCCTTCGCCACCATCGCCCTCCCCCGCCGCGGCGCTGCCAAATTCGCCTACGCCTGGATGGGCGCCTCCCTCGGCTATCAATATGGCTGTTGGAATGGCCTCAAATACTTAAACCACACCTCCCTTGTCGTTGAAACGGTGTCATTTCTCGACTCTCTCACTATTCTCTCCAGAAACGCTCTTAGCATGAAGGTTTCGTACGATCTCTTAGGAAACAACACTGCGTTGTGGAGGCTGTCGGTGACGGAGCCCGACGGTTTCAAGGAGCTGTCTACTGAGGGACTTGGGGTGGGATCACAATATGTTATGGTGGCGGCGGCGCAACGATGGTGCCTAGGGAGGTGA 477 0.5618 MSSIFFFLHSYPYSAEEIHQAYNHTCSTATKNGLQVLHYSHHHTSFATIALPRRGAAKFAYAWMGASLGYQYGCWNGLKYLNHTSLVVETVSFLDSLTILSRNALSMKVSYDLLGNNTALWRLSVTEPDGFKELSTEGLGVGSQYVMVAAAQRWCLGR 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01200 158 PANTHER PECTINESTERASE 19 138 - -
Gma04g01200 158 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 19 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01200 Gma-Chr4 17714130 17716195 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01200 27 141 Carbohydrate Esterase AT5G09760 51.304 2.83e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01200 - - gmx:100802102 172.555