Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01195 ATGGAATCGCCTCCGCAGCTGGGTTCAAGAGGGGCAGAAACACTTAAACATATAGCTCCTGGATCATCAATTTCTGTTGCATATCACCCATCTTTTGGACCTTATGATGACCTCCTCTTTCTAGAGCTTGATGAGAAACTTCTCCCAGATGTTCTGAATGAAAGGGTGGTCTTGAGAGGACAGCCTGATGAAGATGCCGTTCTTTGTACTCTATCCAAAACCTATGCTATGAAGTTTGTTGGAACTTCCAATTCTGTTCTGCTTGTACCTCCAGCAAATCATTCGGAATTTAGTGAAAATCCACAAAAGAATGATAGTACTAATGATGAAGACAAAGTTGTTGTACCTGTACTCAAAGTTGTATCTGGTAATATGGAGCTTATTGAGACAGCCCCCAGACTTGATAAGCTTAAATTACTTCTGTCAGAAAAGCCTTACAAATTGGAGGAGGATGACATGGGAAATTTAGAAGAGAATCAGGAATCTAGAATAGGACTATATAACTGGAATTATCTTGTAGACAATATTCAAGCTAGTGACAAGGAATTATTGTCGGGACTGCAGGCTCTTTCAGCGCTGGAGATTAATGGGTATTGGAGACTAGTAGACGGGAGTTACATGGACATGATTCTGGGAATGCTTTTGAAAAATGCAGTGTTGAATGACTGGTCACTTAATGCTTTAAATGAAGATGAAGTTGTGAGTATACTGGAATCAGATGGATTTCCTAGGGTGCTTGCAAGGCATTGTTTGCACGTATATGGCAACAAAGTAAATGAGTGCATGCCTAGCTTTGTTTGGAAGTTGGATGAGAAGCGAGTATGCATACATTTTGCAAGAGAAATCCTGAAAGGGGGTAAGAGAAAGTTAGAGAGTTTCATGGATGAATGGAAGCAGAAGATTCCAGACGGAATGCATCCCACTTTTGATCTTGTGGAAGGAGAGGTATTAACAGAGAGACTTGGAGTTGAGACATGGGTTCGTGCCTTCAGTGTCGCATCTTTGCCTTCCACTCCAGCCGAGCGTTTCTCCATTCTTTTCAGAGAGAGGCCAAAATGGGAATGGAAAGATCTGCAGCCCTATATCAGAGATCTGAAGGTACCAGGTCTTTCTTCAGAAGGGTTGCTACTCAAATACACTCGAAGGACACAACCATCACCTGACACAGAACCAGTTTTCAGTGCAAGATAG 1191 0.419 MESPPQLGSRGAETLKHIAPGSSISVAYHPSFGPYDDLLFLELDEKLLPDVLNERVVLRGQPDEDAVLCTLSKTYAMKFVGTSNSVLLVPPANHSEFSENPQKNDSTNDEDKVVVPVLKVVSGNMELIETAPRLDKLKLLLSEKPYKLEEDDMGNLEENQESRIGLYNWNYLVDNIQASDKELLSGLQALSALEINGYWRLVDGSYMDMILGMLLKNAVLNDWSLNALNEDEVVSILESDGFPRVLARHCLHVYGNKVNECMPSFVWKLDEKRVCIHFAREILKGGKRKLESFMDEWKQKIPDGMHPTFDLVEGEVLTERLGVETWVRAFSVASLPSTPAERFSILFRERPKWEWKDLQPYIRDLKVPGLSSEGLLLKYTRRTQPSPDTEPVFSAR 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01195 396 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 19 396 IPR019128 GO:0007064|GO:0031390
Gma04g01195 396 Pfam Sister chromatid cohesion protein Dcc1 40 362 IPR019128 GO:0007064|GO:0031390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01195 Gma-Chr4 17570737 17573152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01195 11 396 C3H Transcription Factor Family AT2G44580 56.378 7.72e-157 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01195 K11271 - gmx:100817511 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01195 04 17570737 17573152 Gma06g02756 06 51340348 51341717 GST