Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01193 ATGGGAAGGGTTGCTACAAAGTTAAATATCGACTTTGTGATATCCACTAGAGACAATTTCTACGATGATGGATTGACTGGTATAGATGACCCTGCATTTGAAATTTCGTTCTCAAAAATCTACACTGCCAAGAGCCTCCAAAAGCAATGGTATAGTGTGTTGGGCAACCATGACTACAGGGGTGATGTTGAAGCTCAATTGAATCCAATCCTTCAGAAAATTGATCCTAGATGGATCTGCCAAAGATCATTTATTGTTGATACTGAAATTGCTGAGTTCTTCTTCATTGATTCAACACCTTTTGTGGACAAGTATTTTCTTAAGCCAAAGGACCACAAGTATGACTCGAGAGGAGTGCTTCCAAGGGAAAAATATTTATCAAAGCTCTTGAAGGATCTGGAAATAGCATTGAAGGATTCTACTGCCAAGTGGAAGATTGTTGTGGGGCATCATCCTCAATGTGAGAAGGATAAGGAGCGTGTTCTGGTTCATTGCATGTCAAGAAAGAGTAGGTCTCCAGCTATCGTGATTGCATACTTAATGAAGTCCAAAGGATGGAGACTTGTACACAGTTATCAGTGGGTAAAGGAACGGAGACCTTCTGTTGAATTAGCTCAAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCAGGTGATAGTTTTATTACTTCTATTATAAATGGAGCTGATTTGGTGCCTACAATTCACTGGGGAGAGTGTAATTTAAGTAATTAG 735 0.4 MGRVATKLNIDFVISTRDNFYDDGLTGIDDPAFEISFSKIYTAKSLQKQWYSVLGNHDYRGDVEAQLNPILQKIDPRWICQRSFIVDTEIAEFFFIDSTPFVDKYFLKPKDHKYDSRGVLPREKYLSKLLKDLEIALKDSTAKWKIVVGHHPQCEKDKERVLVHCMSRKSRSPAIVIAYLMKSKGWRLVHSYQWVKERRPSVELAQAACMTWELAESGDSFITSIINGADLVPTIHWGECNLSN 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01193 244 PANTHER TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 1 152 - -
Gma04g01193 244 Pfam Dual specificity phosphatase, catalytic domain 153 202 IPR000340 GO:0008138|GO:0016311
Gma04g01193 244 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 202 IPR000387 GO:0016311|GO:0016791
Gma04g01193 244 Gene3D - 1 175 IPR029052 -
Gma04g01193 244 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 121 202 IPR029021 -
Gma04g01193 244 Pfam Calcineurin-like phosphoesterase 8 152 IPR004843 GO:0016787
Gma04g01193 244 PANTHER PURPLE ACID PHOSPHATASE 1 152 - -
Gma04g01193 244 SMART dsp_5 70 215 IPR020422 GO:0006470|GO:0008138
Gma04g01193 244 SUPERFAMILY Metallo-dependent phosphatases 1 153 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01193 Gma-Chr4 17510127 17514165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01193 153 205 Protein tyrosine phosphatase (PTP) family AT2G04550 75.472 1.17e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01193 K14379 - gmx:100807560 315.464