Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01192 ATGGACAAGAGATATGCAGCAAATTTGTTGGAAGGATTTTCTCAGACCCAGATTAGCACATTAGCCGTCAAGGATAATCTTCTTGTTGCTGGTGGCTTCCAAGGAGAGCTTACTTGGAAAAAGGTGAGCAAAGCTCCTAAGATACAACGGCTGGTCACTCCCCTGACCCTCCAAAGAAATAGGGCAAGGATTGCAGGTAAGAAGAAGAGAATTGCCAAAGCAAAATCAGAGGCAGCAGAGTACCAGAAACTTCTTGCCTCCAAAAAAATAAGCCTAGTTCAGGTTTCTGTTTTGACTTCTGAGTGTCTAGTTAAGCATTGCTGCTATAGTAGTGCTATGGAACTGAGGAAGCTTCAACTTGCACAAAATAATACTTAA 378 0.4233 MDKRYAANLLEGFSQTQISTLAVKDNLLVAGGFQGELTWKKVSKAPKIQRLVTPLTLQRNRARIAGKKKRIAKAKSEAAEYQKLLASKKISLVQVSVLTSECLVKHCCYSSAMELRKLQLAQNNT 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01192 125 PANTHER 40S RIBOSOMAL PROTEIN S6 38 106 IPR001377 GO:0003735|GO:0005840|GO:0006412
Gma04g01192 125 Coils Coil 57 84 - -
Gma04g01192 125 Gene3D - 21 91 - -
Gma04g01192 125 PANTHER 40S RIBOSOMAL PROTEIN S6 38 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01192 Gma-Chr4 17505765 17509306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01192 39 88 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 86.000 1.16e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01192 K02991 - gsj:114406377 85.1149