Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01191 ATGGGGTCTATGGGTAACTcaaatccaaatctaaatccaaatccaaatccaaatccaTGGACTCCAAAGGATTGTTCTGAAGGAATTTGCAGCATCTATTGTCCTCAGTGGTGTTACAAAGTGTACTCTCCTCCCCCTCCAATTCTACTAGGTGATGGCGATGATGACCCTTCAGGCTTTGAATTCTCTCCTCTCATAGTTGCTGTGATTGGAATCTTGGCTAGCACTTTCATCTTGGTCACTTACTATACCATTATCTCAAGGTTCTGCAGGCGCAGAAACAACACCAATGATTCAACAGAAGACGATGGAAACAGCGAATTGGCTCGAGTTTCTTCTTCTGCCAATTCTGGCTTAGATGAGGCTCTCATCAAATCCATCACGGTTTGCAAGTACAACAAACGTGGTGGTTTGGTGGAAGGTCACGATTGTTCGGTTTGTTTGAGCGAGTTTGAAGAGAATGAAGACTTGAGATTGTTGCCCAAATGCAACCATGCTTTTCATCTCCCTTGCATTGATACTTGGCTCAAGTCTCATGCCACTTGCCCTTTGTGTCGTGCTTCTGTCACCGCTTGTCCGAATCCGAATTCATCCATGGAACCGCCACCAAGAGTCATTGTTAATGCCTTGGAACACCAGCAAAGGAGTAACCATGTTGTTGTCGTTGTTGAGAGTTCCGAGGAACAAGAGAAGGTGGTTAGCTTTGATGCTCATACTTTGAGTGACGGTGAAGGGTATCACACATAA 747 0.4297 MGSMGNSNPNLNPNPNPNPWTPKDCSEGICSIYCPQWCYKVYSPPPPILLGDGDDDPSGFEFSPLIVAVIGILASTFILVTYYTIISRFCRRRNNTNDSTEDDGNSELARVSSSANSGLDEALIKSITVCKYNKRGGLVEGHDCSVCLSEFEENEDLRLLPKCNHAFHLPCIDTWLKSHATCPLCRASVTACPNPNSSMEPPPRVIVNALEHQQRSNHVVVVVESSEEQEKVVSFDAHTLSDGEGYHT 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01191 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 192 IPR013083 -
Gma04g01191 248 ProSiteProfiles Zinc finger RING-type profile. 144 186 IPR001841 -
Gma04g01191 248 Pfam Ring finger domain 143 186 IPR001841 -
Gma04g01191 248 SUPERFAMILY RING/U-box 138 193 - -
Gma04g01191 248 PANTHER RING-H2 FINGER PROTEIN ATL53-RELATED 21 239 - -
Gma04g01191 248 CDD RING-H2_PA-TM-RING 143 186 - -
Gma04g01191 248 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 21 239 IPR044675 -
Gma04g01191 248 SMART ring_2 144 185 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01191 Gma-Chr4 17500114 17501430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01191 16 207 C3H Transcription Factor Family AT5G17600 57.143 1.15e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01191 - - gmx:102660020 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01191 04 17500114 17501430 Gma06g02758 06 51370708 51371473 GST