Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01160 ATGCCTTTCATGTTCGGCGGTTCATGCCTCCACATTCTCAAAGCCTCCCACCCCGACGTTTTTGAGGAGGTTGTCATTTCAACCATTCTCAAAGATGTCTTGAAGGCTTTGGAGTACCTTCACCATCATGGCCACATCCACTGCGATGTCAAGGCCGGAAACATTCTCATCGATTCACGCAGCACCGTCAAGCTTGACGACTTTGGTGTCTCTGCCTGCCTCTTTGATTCGGGTGACCGCCAACGCACACGTAATACATTTGTCGGAACACCTTGCTGGATGGCATCCGAGGTCATGGAGCAACTTCATGGCTATAATTTCAAAGCTGACATATGGTCATTTGGTATAACCGCCTTGGAGCTTGCACATGGTCATGCCCCTTTCTCAAAATTTCCACCAATGAAGGTACTTCTCATGACTCTGCAAAATGCACCCCCTGGCCTTGACTACGAAAGGGATAAGAAGTTCAGTAAGCCTTACTATTTTCAGGTTTTGCCTCCATCTGTTCGCATGGTTAAGTCTGTTGCTTCAAATTTCCTTTTGGAATGGTTGTTCCAACACGAGCATGAACACCGCCAATGGTCTGCTGCAATTTCTCTTGGATTAATCGCTAGTTGCCTTCATGTAACAAATCATAAAGAGAGATATCATAACATCACAGGATTTCTTGAGGATGTGAAGTGGCTTCAAACAGTCACCAAACTGCCAATTCTGGTGAAGGGTGTGCTGACTGCTGAGGACACAAGGATAGCTGTACAAAGTGGTGCAGCTGGAATTATATATAGTGTCCAATCACGGAGCTAG 804 0.4614 MPFMFGGSCLHILKASHPDVFEEVVISTILKDVLKALEYLHHHGHIHCDVKAGNILIDSRSTVKLDDFGVSACLFDSGDRQRTRNTFVGTPCWMASEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDKKFSKPYYFQVLPPSVRMVKSVASNFLLEWLFQHEHEHRQWSAAISLGLIASCLHVTNHKERYHNITGFLEDVKWLQTVTKLPILVKGVLTAEDTRIAVQSGAAGIIYSVQSRS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01160 267 SUPERFAMILY Protein kinase-like (PK-like) 1 208 IPR011009 -
Gma04g01160 267 Pfam FMN-dependent dehydrogenase 188 262 IPR000262 GO:0016491
Gma04g01160 267 Gene3D Aldolase class I 176 266 IPR013785 -
Gma04g01160 267 Pfam Protein kinase domain 2 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01160 267 ProSiteProfiles Protein kinase domain profile. 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01160 267 PANTHER SERINE/THREONINE-PROTEIN KINASE MPS1-RELATED 1 161 - -
Gma04g01160 267 SMART serkin_6 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01160 267 SUPERFAMILY FMN-linked oxidoreductases 212 262 - -
Gma04g01160 267 Gene3D Transferase(Phosphotransferase) domain 1 5 151 - -
Gma04g01160 267 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01160 Gma-Chr4 16576672 16578913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01160 1 160 MAP Kinase Kinase Kinase Kinase AT1G79640 82.500 3.10e-97 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gma04g01160 Pkinase 5.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01160 K08835 - gmx:100819537 310.457