Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01158 ATGAAAGGATTACACAACCTGTGTGCTGTGTGCAATAACACAAGACCAAAATTTGAATGCAACAGAAAGAGAGACTTCACATTTGCTGAACTACATGCAGCCACACAAGGCTTTTCCCCAAAGAATTTTCTGTCTGAAGGGGGGTTTGGTTCTGTCTACAAAGGGAGGTTTTATGGGAAGAAGATTGCTGTTAAGCAAGCTAAACTTATTTGTGCAAACCACAAAGGAGAGAAGGAATTCAAGTCTGAAGTTGATGCACTCAGCAAAGCAAGACATGAGAATGTGGTCAAACTGTTAGGATCATGCACAGAAGGGAATCATAGACTTCTTGTCTATGAATATGTCTGCAATGGTTCATTGGACCAACGTTTATCACGCGAGACTGGAGTCGCCCAGGCAAATGAAATCTGTGAAAACAAGGGTTCATCAAGTGGGTTTTCTCGCCTAGGCGAGAATGGCTCACCTATACGAATGTACTAG 480 0.425 MKGLHNLCAVCNNTRPKFECNRKRDFTFAELHAATQGFSPKNFLSEGGFGSVYKGRFYGKKIAVKQAKLICANHKGEKEFKSEVDALSKARHENVVKLLGSCTEGNHRLLVYEYVCNGSLDQRLSRETGVAQANEICENKGSSSGFSRLGENGSPIRMY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01158 159 PANTHER OS01G0253100 PROTEIN 5 127 IPR045271 GO:0004714|GO:0006468
Gma04g01158 159 SUPERFAMILY Protein kinase-like (PK-like) 19 129 IPR011009 -
Gma04g01158 159 PANTHER TYROSINE KINASE FAMILY PROTEIN 5 127 - -
Gma04g01158 159 Gene3D Phosphorylase Kinase; domain 1 8 114 - -
Gma04g01158 159 ProSiteProfiles Protein kinase domain profile. 38 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01158 159 SMART tyrkin_6 38 159 IPR020635 GO:0004713|GO:0006468
Gma04g01158 159 Pfam Protein tyrosine and serine/threonine kinase 42 130 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01158 Gma-Chr4 16550719 16553636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01158 26 154 Receptor kinase-like Gene Family AT1G56120 46.269 3.31e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gma04g01158 PK_Tyr_Ser-Thr 1.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01158 - - gmx:102663919 227.639