Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01137 ATGGTTACCTCAACACAGGATCATAATGGCGGTTCTTGCTGTGTGACAAGGTTGATAAGGAATGGTAACCTTGTTGTGTCTAATGCTAGTGATTTTCGTGTTGTGATTAGCAAAAAGGGTATGGCTGAAGTCCTAACATCTGAACACAAGCCTTCTAGGGAAGATGAAAGGGACAAAATTGAGACTCGGGGAGGTCTTGATGCGACAACAACTAATGCGACATTGAGTAGCTCAAGCGCAAGGTTGACAGCCACAGAGAAGCGCAATGTTGTGTTTAGGAAGCTCAAGATCGCTGCAAAAACAAAATTTGGGGATTTATTTCAAGCCAATGTCTAA 336 0.4286 MVTSTQDHNGGSCCVTRLIRNGNLVVSNASDFRVVISKKGMAEVLTSEHKPSREDERDKIETRGGLDATTTNATLSSSSARLTATEKRNVVFRKLKIAAKTKFGDLFQANV 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01137 111 PANTHER PROTEIN PHOSPHATASE 2C 8 66 IPR015655 GO:0004722|GO:0006470
Gma04g01137 111 SUPERFAMILY PP2C-like 6 66 IPR036457 -
Gma04g01137 111 ProSiteProfiles PPM-type phosphatase domain profile. 1 111 IPR001932 -
Gma04g01137 111 Pfam Protein phosphatase 2C 5 66 IPR001932 -
Gma04g01137 111 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 8 66 - -
Gma04g01137 111 Gene3D - 1 93 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01137 Gma-Chr4 15973520 15974801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01137 10 65 PP2C-type Phosphatase Gene Family AT1G07160 66.071 1.36e-20 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01137 K17506 - gmx:100813073 98.5969