Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01129 ATGTCCCTCCTCAGCCGATTCTTCTACAAGCGCCCCCCTGACGGCTTACTCGAATTATCCGACAGAGTCTACGTCTTCGATTCCTGCTTCTCCACGGAGGCACTCCCGGAGGGAATGTACAGCCTCTACCTCCGCCAAATCATCTCCGACCTCCACGAGGACTTCCCGGAATCCACTTTCCTCGCCCTCAACTTCCGCGACGGCGACCACCGCAGCCGCTTCTCCCGCGTCCTCTGCGACCTCGACGCCACCGTCGTCGACTACCCAAAGCAGTACGAGGGATGCCCCCTCCTCCCCCTCTCCCTCCTCCACCACTTCCTCCGCCTCTGCGACTCCTGCCTCGCCGACCCCGCCGCCCTGATCCTCCTCCACTGTGAGCGCGGCGGCTGGCCCCTCCTTGCCTTCCTCCTCGCCGCCTTCCTCGTCTTCCGCAAGGCCGCGCAGACCGGGGAGCGCCGGATTCTCGAGATGGTCCATAAAGAGGCGCCTAAGGGGTTGCTGCAGCTGTTGTCGGCGCTGAACCCGCTGCCGTCGCAGCTGCGGTATGTGCAGTATGTGGCCAGGAGGAACATTGGGGCGGAGTGGCCACCGCCGGAGAGGGCCCTGTCTTTGGACTGTGTTATTCTCAGAGGGATTCCTGGGTTTGATGGCGGGAATGGGTGCAGGCCATTGTTTAGGATTTTTGGCAGGAATTTGCTTAGTAAAGGGGGGCTTTCCACACAGATGATTTATAATATGCATAAGAAGAAGAAGAGTTTGAGGCACTATAGACAGGCAGACTGTGATGTGATTAAGATTGATATTCAATGCTTAGTGCAAGGGGATGTGGTTTTGGAGTGTGTCCATTTGGATTTGGATCTGGAGAGGGAAGTGATGATGTTTCGGGTGATGTTCAACACGGCGTTTATTCGGTCCAACATTTTGATGCTGAATGCTGAGAACTTAGACATTCTTTGGGATTCGAAGGAGCGGTATCCGAAGGGCTTCCGGGCTGAGGTTTTGTTTGGGGAGGTTGAAAGCATAAGTCCTCCAAGGGCTCAGACGAGTATTTTAGATGGTGAGGTGAAAGGTGGATTGCCTATTGAGGCATTTTCAAGGGTTCAGGAACTTTTTAGTGGTGTAGAATGGGTTGAAAGTGGGGATGCTGCTGCTGTCTGGCTGCTCAAACAGCTTACAGTCTTAAATGATGCCAAAGAGCTTTCAAGGTTTCAAGGTAGAGGAAGTTGGTATTCATCACCCGCTGACTCTGACTCTGAAAATAATGAATCGAGCACTGCTGATAGTTCAGATGAGGCCTTTGATGTTATTCCCAAGTCTTATGCTGATCCTTCAAAATTATTGATATCTGACAACCCTGATTTGGTCCATTTAGCTTTTGAGAACAATGGTGGAGATTATGTAAATCTCACTTCAAGAACACCTGATCAGTCGTTGACTGATAATGTTTCATCACCTCATCATGCTCCAAGAAAGGAATATTCTCCTTGTTCCTCTCCACCATCACCTTCACCAGTTCCCGCTACTCAACCTTTTCCAATACCGGCACCACCACCTCCTACATCAAATATACAGCCAGATTTAGCTCCTCCCCCACCTCCACATCAGATAGATCAGAATGTGAACAATGCTTCTACATTTCCTTCACCTCCTCCTCCTCCTCCTCCTTTGGTTTCCAATACTCCTAGTCAACCTCCACCTCCTCTAGGACCTGTACGAACAAGTTCAGCCCCACCGCCAccacctcctcctccaggtcatgtacaaacaggttcagccccaccacctcctccacgatctgtacaaactggttcagctccactgcctccacctccagaatctgtacgaacaggtttggtaccaccacctcctccagGTCCCGTGCGAATAGGTTCTGCCCCGcctccacctccacctccacctccacctccacctccacctcctccgggtcctgtacgaacaggttctgtcccgccaccacctccacctcctccaggtcctgtacgaataggttctgtcccgccaccacctccacctcctccaAccccaccaccacctccacctcctccaggtcctgtacggacaggttcagccccaccaccacctccacctcctccaggtcctgtacaaacaggttcagccccaccacctcctcctcctcctccaagtatacgaacaggttcagctccaccacctcctcctcctcctccaagtgtacgaacaggttctgctccaccaccaccaccaccACCATTGGCACCAAAACCTCCAGGTGCTCCTCCTCCTCCACCTGGCCGTGGTACATCTCCAATGCCACCTCCACCACCTGCAGTTAGGGCCCCTGGTGTGGCACCACCACCAGGCAAAGCTTCAACAACAAATGTTGGAAGAGGTCGTGGTACTGGTGGTACTGTTAATGCTCCTAAGAAAACTTTGCTAAAACCCCTACATTGGGTGAAAGTTGCTCGAGCAGCCAAGGGAAGTCTATGGGCTGATTCACAGAAACAGGATAGTGGAACAAGGGCCCCTGAGATTGATATATCAGAACTTGAGAGCCTGTTTTCAGCAGCATCTACTTCTGATGGGAGCAGTACTAAGGGTGGAGGACGACGTGGTCCTAATATTAACAAACCTGAGAAAGTACAATTGGTTGATTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATATGCTTATAGCAGTCCTGGCATTGGATTCTGCAGTTCTGGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCTACAAAGGAAGAGATGGAGATGTTAAAGAATTATACAGGAAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTTATGGAGCTCATGAAGGTTCCACGTGTGGAATCCAAATTAAGGGTTTTTGCTTTTAAAATCAACTTTTCTTCTCAGGTGAATGATTTGAAGTTAAATTTGAACACAATCAACAATGCAGCCAGAGAGGTGAAAGAATCTGGGAAATTGCGTCAAATAATGCAGACCATTCTTACACTGGGCAATGCCTTGAATCAAGGAACAGCACGGGGATCAGCTGTTGGATTCAAATTGGATAGCCTTCTTAAATTATCTGATACTCGTGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTCGCTGAGAAGATGCCAGAATTGCTAGATTTTGATAAGGATCTTGTCCATTTGGAAGCAGCTTCTAAGATTCAACTAAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTAGAGAAAGTTGAGCAAGAACTTGCTGCTTCTGAAAATGATGGTGCTATATCTACTGGATTTCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGATGTGAGGTCTCTTATATCATTGTATTCTGAAGTGGGAAGAAGTGCAGACTCTTTGTCCCAGTACTTTGGGGAGGATCCAGCTAGATGCCCTTTTGAACAAGTGACGCAAATCCTTGTTGTCTTTGTCAAGATGTTCAACAAGTCAAGGGAGGAGAATGAAAGGCAGGCAGATGCTGAAAAAAAGAAATTAGAGAAAGAAGCATTGAAGGAAAGGACAGCAAATAACTCGCTTTCCAAAAAAGATGGCGTTCGATAG 3648 0.4109 MSLLSRFFYKRPPDGLLELSDRVYVFDSCFSTEALPEGMYSLYLRQIISDLHEDFPESTFLALNFRDGDHRSRFSRVLCDLDATVVDYPKQYEGCPLLPLSLLHHFLRLCDSCLADPAALILLHCERGGWPLLAFLLAAFLVFRKAAQTGERRILEMVHKEAPKGLLQLLSALNPLPSQLRYVQYVARRNIGAEWPPPERALSLDCVILRGIPGFDGGNGCRPLFRIFGRNLLSKGGLSTQMIYNMHKKKKSLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDLEREVMMFRVMFNTAFIRSNILMLNAENLDILWDSKERYPKGFRAEVLFGEVESISPPRAQTSILDGEVKGGLPIEAFSRVQELFSGVEWVESGDAAAVWLLKQLTVLNDAKELSRFQGRGSWYSSPADSDSENNESSTADSSDEAFDVIPKSYADPSKLLISDNPDLVHLAFENNGGDYVNLTSRTPDQSLTDNVSSPHHAPRKEYSPCSSPPSPSPVPATQPFPIPAPPPPTSNIQPDLAPPPPPHQIDQNVNNASTFPSPPPPPPPLVSNTPSQPPPPLGPVRTSSAPPPPPPPPGHVQTGSAPPPPPRSVQTGSAPLPPPPESVRTGLVPPPPPGPVRIGSAPPPPPPPPPPPPPPPPGPVRTGSVPPPPPPPPGPVRIGSVPPPPPPPPTPPPPPPPPGPVRTGSAPPPPPPPPGPVQTGSAPPPPPPPPSIRTGSAPPPPPPPPSVRTGSAPPPPPPPLAPKPPGAPPPPPGRGTSPMPPPPPAVRAPGVAPPPGKASTTNVGRGRGTGGTVNAPKKTLLKPLHWVKVARAAKGSLWADSQKQDSGTRAPEIDISELESLFSAASTSDGSSTKGGGRRGPNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLIAVLALDSAVLDIDQVENLIKFCPTKEEMEMLKNYTGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKINFSSQVNDLKLNLNTINNAAREVKESGKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELAASENDGAISTGFRKVLKNFLDIAEADVRSLISLYSEVGRSADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADAEKKKLEKEALKERTANNSLSKKDGVR 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01129 1215 Gene3D - 196 341 - -
Gma04g01129 1215 MobiDBLite consensus disorder prediction 408 430 - -
Gma04g01129 1215 MobiDBLite consensus disorder prediction 854 869 - -
Gma04g01129 1215 Coils Coil 1177 1211 - -
Gma04g01129 1215 MobiDBLite consensus disorder prediction 408 431 - -
Gma04g01129 1215 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Gma04g01129 1215 MobiDBLite consensus disorder prediction 468 808 - -
Gma04g01129 1215 PANTHER FORMIN-J 714 1206 - -
Gma04g01129 1215 PANTHER FORMIN-J 1 611 - -
Gma04g01129 1215 Pfam Formin Homology 2 Domain 807 1177 IPR015425 -
Gma04g01129 1215 MobiDBLite consensus disorder prediction 468 484 - -
Gma04g01129 1215 Gene3D Formin, FH2 domain 803 1188 IPR042201 -
Gma04g01129 1215 Coils Coil 981 1001 - -
Gma04g01129 1215 Gene3D Protein tyrosine phosphatase superfamily 15 190 IPR029021 -
Gma04g01129 1215 MobiDBLite consensus disorder prediction 495 536 - -
Gma04g01129 1215 MobiDBLite consensus disorder prediction 1179 1215 - -
Gma04g01129 1215 SUPERFAMILY Formin homology 2 domain (FH2 domain) 877 1204 - -
Gma04g01129 1215 MobiDBLite consensus disorder prediction 854 877 - -
Gma04g01129 1215 ProSiteProfiles Formin homology-2 (FH2) domain profile. 802 1202 IPR015425 -
Gma04g01129 1215 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 199 338 IPR035892 -
Gma04g01129 1215 SMART it6_source 546 1212 IPR015425 -
Gma04g01129 1215 Coils Coil 1083 1110 - -
Gma04g01129 1215 MobiDBLite consensus disorder prediction 545 782 - -
Gma04g01129 1215 Pfam C2 domain of PTEN tumour-suppressor protein 198 336 IPR014020 -
Gma04g01129 1215 SMART PTEN_C2_2 197 337 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01129 Gma-Chr4 15722124 15733706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01129 764 1214 FH2 protein (formin) Gene Family AT1G31810 76.652 0.0 654