Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01126 gtaattaaaaATGTCCTTTCAATATTTGAGATCGATGCAAACCATTTCATGGGACAATTACAATCTCTAAATCTTTCGCAAAACAACCTTACAGAAACCATACCCTTAGAGGTTTTTAGTTTTTCCTCTCTAACAAACTCATTGGATCTGTCACAAAACTCATTGAGTGGTAGTATACCAAAAGAAGTGGGTAACCTAAAAAATATCAACTATCTAGACATGTCTGAGAATCATGCTTCATTGAGGGGTCTTCAAGAGTTAGATCTCTCACAAAATTACTTGTCCGGAACAACTCCTAATGTGCCAACTGGAGGTGTCTTGGGAAATGCAAGTGGGTTAGTGGTGACTGGAAATAGTAAGCTTCGTGGAGTATTTTTGAACTGCATCTACCACAATGCCCCCTTACACAACAGAACCAATGGGTTCTCAACTTCAAGCTTGATAGGGTCTGGAAATTTTAGCTTTGTCTACAAAGGAACTCTTGAGCTAGAAGACAAAGTTGTTGCAATAAAGGTCCTAAACCTTCACAAAAAAGGAGCTCACAAGAGTTTCATTGCTGAATGCAATGCACTTAAAAATATTAAACATCGAAATTTGGTTCAGGCTTTAACATGTTGTTCTAACACGGATTACAAAGGTCAAGGATTTAAAGCCCTAgaaatgtGTCCTAGAACACTAAGTGCAAACTGCAAAGGTCCAAGAACATTAAACCTTGATCAAAGATTAAATATCATGATTGATGTTGCTTCTACATTACATTATCTTCATCATGAATGTGAGCAATCAATCATTCATTGTGATTTAAAGCCACGCAATGTCCTTAATGATGACATGATTGCTCATGTGAGTGATTTTTGCATAGCAAGACTTCTCTCAACCATTAATGGTACCACTTCTAAGCAAACAAGTATAATTGGAATAAAGGGTACTATTGGTTATGCTCCTCCAGAGTACGGAATGGGGTCTGAGGTGTCTATGAATAGCGACATGTATAGTTTCGAGGTTCTTTTGTTGGAGATGCTTACTGGAAGAAGACCCACAGACCAAATCTTTGAAGATGGTCCAAATATGCATAACTTTGTGGAAAATTCATATCCTGATAATCTTTTTCATATTTTGGATCCATCACTTGTACCAAAACCTGAAGAAGCAACAATACAAGAAGAAAATAGTCAGAATCTCACTCCAACAGTTGCAAATTACTTAGTTTCACTCCTTAAGATTGGACTTGCTTGTTCAGTGGAATCACCAAAAGAAAGAATGAATGTGGTGGATGTCACTAGAGAGCTGAGAAAAATCAGAAAAGCCTTTCTTACTGGTGTTGGCACTTGA 1332 0.3701 VIKNVLSIFEIDANHFMGQLQSLNLSQNNLTETIPLEVFSFSSLTNSLDLSQNSLSGSIPKEVGNLKNINYLDMSENHASLRGLQELDLSQNYLSGTTPNVPTGGVLGNASGLVVTGNSKLRGVFLNCIYHNAPLHNRTNGFSTSSLIGSGNFSFVYKGTLELEDKVVAIKVLNLHKKGAHKSFIAECNALKNIKHRNLVQALTCCSNTDYKGQGFKALEMCPRTLSANCKGPRTLNLDQRLNIMIDVASTLHYLHHECEQSIIHCDLKPRNVLNDDMIAHVSDFCIARLLSTINGTTSKQTSIIGIKGTIGYAPPEYGMGSEVSMNSDMYSFEVLLLEMLTGRRPTDQIFEDGPNMHNFVENSYPDNLFHILDPSLVPKPEEATIQEENSQNLTPTVANYLVSLLKIGLACSVESPKERMNVVDVTRELRKIRKAFLTGVGT 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01126 443 Pfam Leucine rich repeat 19 78 IPR001611 GO:0005515
Gma04g01126 443 Gene3D Ribonuclease Inhibitor 4 131 IPR032675 -
Gma04g01126 443 ProSiteProfiles Protein kinase domain profile. 142 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01126 443 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 18 79 - -
Gma04g01126 443 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 135 440 - -
Gma04g01126 443 Pfam Protein kinase domain 143 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01126 443 SUPERFAMILY L domain-like 17 132 - -
Gma04g01126 443 SMART serkin_6 142 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01126 443 ProSiteProfiles Leucine-rich repeat profile. 19 40 IPR001611 GO:0005515
Gma04g01126 443 ProSitePatterns Protein kinases ATP-binding region signature. 148 171 IPR017441 GO:0005524
Gma04g01126 443 SUPERFAMILY Protein kinase-like (PK-like) 128 430 IPR011009 -
Gma04g01126 443 Gene3D Transferase(Phosphotransferase) domain 1 224 439 - -
Gma04g01126 443 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 18 79 - -
Gma04g01126 443 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 135 440 - -
Gma04g01126 443 Gene3D Phosphorylase Kinase; domain 1 132 213 - -
Gma04g01126 443 SMART LRR_typ_2 17 41 IPR003591 -
Gma04g01126 443 SMART LRR_typ_2 81 104 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01126 Gma-Chr4 15661718 15666063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01126 20 438 Receptor kinase-like Gene Family AT3G47580 37.093 4.87e-84 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gma04g01126 Pkinase 4.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01126 - - gmx:100801459 496.123