Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01119 ATGCCTCATCTTGATACTCGCTTATGCATGCTCTTGTGTGTTATACCTCTTGTTGGCGATCTTATTGAGGAGGAGGAGGAAAGGAAACCGGTTGATGAAAAAGACAATGGTCCTACAGATTACTGGAAAGAGAAAAAGGTTGCAGGAAAATGTCGTGATGATTTAGTCTTAAGTCTCCAGGTATTGGGTGATTATCAAAGCTTGCTCACTCCACCTCAATCTGTTCTAGCTGCTGCAAAAGCAATGCTATTTGTTTCTGGCATCACAATAGGGAGTGCATATTTTGACTGCCTCAACATGACAGAGATGCCAGTTGACTGTTGTAAAAACCTTCTTGGTGAAGACTTAGGCCCATTAAATACCAAAGATCTTGAGCAGCTTGAGCACCAACTGGATTCATCTCTTAAGCAAGTGAGGTCCACAAAGATGTTAGGTTATGTGGAGTTTGAAtga 453 0.415 MPHLDTRLCMLLCVIPLVGDLIEEEEERKPVDEKDNGPTDYWKEKKVAGKCRDDLVLSLQVLGDYQSLLTPPQSVLAAAKAMLFVSGITIGSAYFDCLNMTEMPVDCCKNLLGEDLGPLNTKDLEQLEHQLDSSLKQVRSTKMLGYVEFE 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01119 150 Pfam K-box region 109 143 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gma04g01119 150 PANTHER OS07G0681500 PROTEIN 1 111 IPR039638 GO:0016592|GO:2000762
Gma04g01119 150 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 33A 1 111 - -
Gma04g01119 150 Coils Coil 124 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01119 Gma-Chr4 15477147 15478682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01119 109 142 MADS-box Gene Family AT5G15800 82.353 1.73e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01119 - - gmx:100812937 196.052