Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01116 ATGGACCTCTTTGGTCACAACAAACTTGAAGAGAAGAAGAAAAACAAGTTTTTGAAGTTTTGGAGTTTTATGTTGAATCTTTTTTCATGGGTCATAGAAGCTGCAATGGTCATGGCCATAACTTTGGCAAATGCAAGAGGTAAATTTCTTGATTGGGAAGATTTTGTTGGGATTTTCATGCTCCTTCTTTTGAAGTCAAATTTTATAGAGGAGTATAATGTTGCATCTATTATGGCTTGCTTGGCATCAAAAGCTAAGTTTCTTTGTGATAAAAAATGGATTAAGGAGTTTGCATGCATTAATGTTTCAAATGATATAATTTATGCTAAGCAAGAGGATGCAAATGTTTGTCTACTTGAATGTGATCCTCCATAG 375 0.3387 MDLFGHNKLEEKKKNKFLKFWSFMLNLFSWVIEAAMVMAITLANARGKFLDWEDFVGIFMLLLLKSNFIEEYNVASIMACLASKAKFLCDKKWIKEFACINVSNDIIYAKQEDANVCLLECDPP 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01116 124 PANTHER CALCIUM-TRANSPORTING ATPASE 2 123 - -
Gma04g01116 124 Gene3D - 23 92 - -
Gma04g01116 124 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 2 123 - -
Gma04g01116 124 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 76 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01116 Gma-Chr4 15407273 15407647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01116 1 123 Primary Pumps ATPases AT3G42640 49.242 1.32e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01116 K01535 - gmx:100818268 114.39