Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01102 ATGGATAAGATTCTGGAGGCCGATGCAAATAATATGTCTCAGCATTCCTCGTCTTCAGTTGTTGCTCTAGCAATCAAGGGTAACAAGAAAAGCAAATATGTGGTACAATGGGCACTTAATAAGTTTGTTCCTGAGGGAATGATTATCTTCAAGCTGATTCATGTCCATGGTGGTATAAAAGGAGTTCCAACGCCATTGGGAAATGTGATCCCTCTTTCACAAGTGCGTAATGATGTAGCAACTGCATTCAAGAAGGAAGTGGAGTGGCAAACAAATCAAATGCTTCTACCTTTCAAGAGAATGTGTGAGCAAAGAAAGGTGCATGTGGATGTTATAGTGATTGAATCAGATGATGTGGCAACTGCAATAGCAGATGAAGTTGCTAAGGGTGCAATAACCAAACTTGTTGTTGGAGCTTCATCTCGTGGCTTATTTAAAAGTAAACAGAAGGGTATGTCTACAAGAATATCAGTATCCACTCCAAGATTTTGTACAATTTATGCTATTTCTAAGGGAAAATTGTCCATTCGGCCATCAGACATGCCTATTGATGGAAATATTATAGATGACGCTAGTGAAAGTGAAACCAGTTTGTCCACCAGCAGCTCATCTAACTACACTTCCACCTCTCAGACAGAATCTGCCTCAGTTTCATCATATGCTGCTTTACAGTCCTCTTCCCTAACAACACAACGATTTCAAGCTCTTTCAAGTATAAATAGTGCCCTTCTTAGCACAAATCCAAGTTTTGCTGACACTAACCATTCTAGAGGCCAATCTCTAGATCTTGGGAGAGAAAATACTGCTTCAAGTTCTGCTAGAAACTCAGACATTGATCATGCCTTAAGTCGAGTCTCTAGTTGCAAAAGCTTCATTTCAGATACTGAATCTTGGATGTATGATCAAAATTCTTGCAAGGATGTGCAACTAGCAACTACACTTCCATCACCTAATAGGCAGGCAAAATATAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGCCCAAGGACTGCATGCAGTAGCTCAAACTGAGAAAATTGAAGCATCCAGAAAGCTAAATGACCTAAGCAAGAGACGATCAGAAGAAACCATGAGAATGAAAGAGATCATTTCTAAGGAGGAGAAGGCAAAAGAATTAGCAAAACTAGAAAGAGAGAAATATCAAGATGCATCACGAGAAGCTGAATATTTGAAAGAATGTGCTGAAAGAGAAGCGGCAGAAAAGAAAGAAATGGAGTTGAGAGCCATTCGTGCTGCAAAAGAGAAAGAAAAGCTGGAGGATGCTCTCAGTGGTTCCACGCCCCAGTACCGGAAGTTTACATGGGATGAAATAATCTTAGCTACTTCATCTTTCTCTGAAGATCTGAAAATTGGAATGGGAGCGTACGGAGTAGTATACAAGTGCAATTTGTATCACACAACTGTTGCTGTGAAAGTTCTCACTCTCAACACTAACGTAAACAGCAAAAGAAAGCAATTCCAGCAGGAGTTAGAGATTTTGAGCAGAATTCGTCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTCCGGATCATGGATGCCTTGTGTATGAATATATGGAGAATGGTAACTTGGAGGACAGACTACTACGAAAAAACAACACTTCCCCAATCCCATGGTTTGAGAGGTTTCGAATAGCTTTGGAAGTTGCATCATCTCTCGCCTTTCTTCATAGCTCAAAGCCAGAACCTATCATTCATCGCGACTTGAAACCGGCAAACATCTTGCTTGATCGTAACCTTGTCAGCAAGATTGGTGACATCGGCCTTTCTACAGTACTTAATTCAGATAATTTGTCTATCATGTCCAAAGACACTGCACCTGTTGGGACACTCTGCTACATAGATCCTGAGTATCAAAGGACCGGGTTGATATCTCCAAAATCTGACATTTATGCTTTTGGAATGGTGATCTTACAGTTATTGACAGCAAAACCAGCAATAGCACTTGCTCATAAGGTTGAAACAGCTATTGATAGCGGGAATTTAACAGACATACTGGATCCAGAGGCTGGAGCTTGGCCATATCAAGAGACACTAGACTTGGCTTTGCTAGGATTGAGCTGTGCAGAACTTCGGCGAAGAGACCGGCCTGATTTACAAGATCATGTCCTTCCAACACTAGAGAGATTGAAAGAAGTTGTTGATAGGGCCCAATGCTCAGCTTCAATTGTTACTATTAAATCCAAACCTCCTAATCACTTTATCTGTCCAATACTTCAGGATGTGATGGATGACCCTTGTGTTGCTGCTGATGGATATACATATGATCGCAAAGCAATTGAAAAGTGGCTTGAAGAGAACGACAAATCACCAATGACGAACATGGCTTTACCTCATAAGCATTTAATTCCTAATTACACACTGCTCTCAGCAATTTTGGAGTGGAAGTCCAGAGAATCGTGA 2433 0.4081 MDKILEADANNMSQHSSSSVVALAIKGNKKSKYVVQWALNKFVPEGMIIFKLIHVHGGIKGVPTPLGNVIPLSQVRNDVATAFKKEVEWQTNQMLLPFKRMCEQRKVHVDVIVIESDDVATAIADEVAKGAITKLVVGASSRGLFKSKQKGMSTRISVSTPRFCTIYAISKGKLSIRPSDMPIDGNIIDDASESETSLSTSSSSNYTSTSQTESASVSSYAALQSSSLTTQRFQALSSINSALLSTNPSFADTNHSRGQSLDLGRENTASSSARNSDIDHALSRVSSCKSFISDTESWMYDQNSCKDVQLATTLPSPNRQAKYNLELEKLRIELRHAQGLHAVAQTEKIEASRKLNDLSKRRSEETMRMKEIISKEEKAKELAKLEREKYQDASREAEYLKECAEREAAEKKEMELRAIRAAKEKEKLEDALSGSTPQYRKFTWDEIILATSSFSEDLKIGMGAYGVVYKCNLYHTTVAVKVLTLNTNVNSKRKQFQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGNLEDRLLRKNNTSPIPWFERFRIALEVASSLAFLHSSKPEPIIHRDLKPANILLDRNLVSKIGDIGLSTVLNSDNLSIMSKDTAPVGTLCYIDPEYQRTGLISPKSDIYAFGMVILQLLTAKPAIALAHKVETAIDSGNLTDILDPEAGAWPYQETLDLALLGLSCAELRRRDRPDLQDHVLPTLERLKEVVDRAQCSASIVTIKSKPPNHFICPILQDVMDDPCVAADGYTYDRKAIEKWLEENDKSPMTNMALPHKHLIPNYTLLSAILEWKSRES 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01102 810 Gene3D HUPs 8 151 IPR014729 -
Gma04g01102 810 Pfam U-box domain 741 808 IPR003613 GO:0004842|GO:0016567
Gma04g01102 810 Gene3D Transferase(Phosphotransferase) domain 1 529 736 - -
Gma04g01102 810 CDD STK_N 20 172 - -
Gma04g01102 810 SMART Ubox_2 743 805 IPR003613 GO:0004842|GO:0016567
Gma04g01102 810 Coils Coil 373 431 - -
Gma04g01102 810 SUPERFAMILY RING/U-box 738 808 - -
Gma04g01102 810 SMART serkin_6 454 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01102 810 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 16 806 - -
Gma04g01102 810 CDD RING-Ubox_WDSUB1_like 744 784 - -
Gma04g01102 810 SUPERFAMILY Protein kinase-like (PK-like) 436 711 IPR011009 -
Gma04g01102 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 574 586 IPR008271 GO:0004672|GO:0006468
Gma04g01102 810 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 23 147 - -
Gma04g01102 810 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 739 810 IPR013083 -
Gma04g01102 810 ProSiteProfiles U-box domain profile. 739 810 IPR003613 GO:0004842|GO:0016567
Gma04g01102 810 ProSiteProfiles Protein kinase domain profile. 454 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01102 810 Gene3D Phosphorylase Kinase; domain 1 432 528 - -
Gma04g01102 810 MobiDBLite consensus disorder prediction 250 276 - -
Gma04g01102 810 ProSitePatterns Protein kinases ATP-binding region signature. 460 481 IPR017441 GO:0005524
Gma04g01102 810 PANTHER OS02G0152300 PROTEIN 16 806 - -
Gma04g01102 810 Pfam Protein kinase domain 456 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01102 Gma-Chr4 14888254 14895977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01102 18 807 U-box Gene Family AT4G25160 52.190 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gma04g01102 Pkinase 6.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01102 - - gsj:114409387 1511.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01102 04 14888254 14895977 Gma06g02819 06 52024214 52031044 GST