Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01089 ATGATGAATACTTCTTCAGCTTTCGATAAAGAAAATGTTAAGGGGAAAGAGAAATGCAATTGTTGCTCTTATTGTGAAAGAGCATTTGACAATTATGAAGGTCTTGAATATCATAAAAAAATGCATGAAGTTGAGTTTAAGCGACTCGTCAATCAAAGCAATCATTTTCATAATTCAATGGATATCAGCAAGCCCATTCTTGGACATGGAAATGTCTCAATGAAAACTTTGTATGGAGCTACAACAAAcaatccttgtgtaacaaaaggacattgttatggtggcaataacagaggagaccataattcattgtttatgacttcaagttattcttttacaagaaccaacaatgcatccttggtagcgtcacttccaaataaggagaccaatccttttttaacgaatggaaattgttatggtggtaatagccaaggagaccataattcattgttcatgccacctaattattcttttacaagtagcaacaatgcatccttggtagcgccaattccaactaaggggatttcttgtgtaacaaaag 541 0.1516 MMNTSSAFDKENVKGKEKCNCCSYCERAFDNYEGLEYHKKMHEVEFKRLVNQSNHFHNSMDISKPILGHGNVSMKTLYGATTNNPCVTKGHCYGGNNRGDHNSLFMTSSYSFTRTNNASLVASLPNKETNPFLTNGNCYGGNSQGDHNSLFMPPNYSFTSSNNASLVAPIPTKGISCVTK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01089 180 ProSiteProfiles Zinc finger C2H2 type domain profile. 20 47 IPR013087 -
Gma04g01089 180 ProSitePatterns Zinc finger C2H2 type domain signature. 21 42 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01089 Gma-Chr4 14412235 14412911 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma04g01089 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01089 - K09228 gmx:102662834 386.341