Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01086 ATGAATAATTTTTCTCATGTTCCCCCCGGTTTTAGGTTCCACCCTACTGATGAAGAACTTGTTGATTACTACCTAAGGAAGAAAATTACCTCAAGAAGGATTGACCTCGATGTCATAAAAGATGTGGACCTCTATAAAATTGAGCCATGGGACCTTCAAGAGCTTTGCAGAATAGGAGCAGAAGAGAAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACTGGAACTCGCACAAATAGAGCAACAGCAGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAAGCAATCTATTCGAAGCATGACTTGATAGGGATGAGGAAAACCTTAGTCTTTTATAAAGGTCGGGCCCCAAATGGACAAAAATCAGATTGGATCATGCACGAGTATCGACTTGAAACAGATGATAATGGCGCACCACAGCAGGAAGAAGGATGGGTTGTGTGTAGAGTATTCAAAAAGAGACTAACAACCATGCGTAAACTGAGTGAGCATGATTCTCCCTGTTGGTATGATGACCAAGTCTCTTTCATGCAAGACTTGGACTCACCAAAGCAAAGCTCTCAACCTAATTTTCCCTACCAGCAGTTCCAATATCCTTGCAAGAAAGAGTTAGATTTTTCATACCATTTACCTCTCCAGCTTCCATTAGAGAACCAAAAATTGTTCCAATCTGCAGCCTCCAACTCAATGACACCATATGGTATAGAAGAAAACCCTAATGCCATGCAGCCAGCATCAATCATGCAACAAGTTCAACAACAAAATTTTCAAGTGTTTGGAAACAATTCCAATGATCAACAAGTGGCTGATTGGAGAGCTCTTGACAAGTATGTTGCTTCACAACTTAGTCAAGAAGATGCATCCAAAGATCACAATAGTTATTCAAACGCAGACAACATTTTTCAAGTGAAGAACAATAGCACTATTGAACAGTTGAGGGACTTGGACAAGGAAGAAAAGATGGCTGAAAATGCCTCAACATCAACCTCAAGCTGTCCAATTGACATGTGGAAATAG 1029 0.4023 MNNFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGAEEKNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDDNGAPQQEEGWVVCRVFKKRLTTMRKLSEHDSPCWYDDQVSFMQDLDSPKQSSQPNFPYQQFQYPCKKELDFSYHLPLQLPLENQKLFQSAASNSMTPYGIEENPNAMQPASIMQQVQQQNFQVFGNNSNDQQVADWRALDKYVASQLSQEDASKDHNSYSNADNIFQVKNNSTIEQLRDLDKEEKMAENASTSTSSCPIDMWK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01086 342 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Gma04g01086 342 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 331 - -
Gma04g01086 342 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 331 - -
Gma04g01086 342 MobiDBLite consensus disorder prediction 328 342 - -
Gma04g01086 342 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Gma04g01086 342 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Gma04g01086 342 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Gma04g01086 342 Coils Coil 309 329 - -
Gma04g01086 342 MobiDBLite consensus disorder prediction 320 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01086 Gma-Chr4 14075752 14078099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01086 1 342 NAC Transcription Factor Family AT1G12260 56.425 1.65e-128 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma04g01086 NAM 4.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01086 - - gmx:100809321 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01086 04 14075752 14078099 Gma06g02832 06 52158511 52167466 GST