Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01083 ATGCGCAAACATGGCTCAACACTTCTCTCACGAACTTTCAAACGTGTATTAAGGCACATGTTGTGGTGGCAAGTTGGTTCTGGGAATTTCAAGACCGTGCAAGATGCGGTCAATGCAGCAGCAAAGAGGAAACTGAAGATGAGGTTTGTGATACATGTGAAGAAAGGGGTGTATAGAGAGAATATTGATGTTGCTGTGCACAATGATAACATCATGCTGGTTGGCGATGGGTTGAGAAATACCATAACCACGAGTGGCAGAAGTTTTCAAGATGGTTATACCACCTATAGCTCAGCAACTGCTGGTATAGATGGCCTTCACTTCATTGCACGCGACATCACCTTCCAAAACATCGTCGGTCCTCACAAGGGTCAAGTCGTGGCACTCCGCTCAGAATCAGACCTCTTTGTCTTCTACCGGTGTGCCATAATAGGATACCAGGACACCTTCATGGCTCATGCACAACGACAATTTTACCGCCCATGCTACATCTACGGCACAATGGACTTCATCTTTGGTAACTCCGCGGTGGTGTTCCAAAATTGTTACATTGTTGCAAGAAAACCCTTAGACGGCCAAGCCAACATGATCACAGCTCAAGGCATTTTGAGGGTGGTGTTCTCCCTTCGCGTCGACATTGTCGAGGTTACTCATTAA 657 0.4642 MRKHGSTLLSRTFKRVLRHMLWWQVGSGNFKTVQDAVNAAAKRKLKMRFVIHVKKGVYRENIDVAVHNDNIMLVGDGLRNTITTSGRSFQDGYTTYSSATAGIDGLHFIARDITFQNIVGPHKGQVVALRSESDLFVFYRCAIIGYQDTFMAHAQRQFYRPCYIYGTMDFIFGNSAVVFQNCYIVARKPLDGQANMITAQGILRVVFSLRVDIVEVTH 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01083 218 PANTHER PECTINESTERASE 18 201 - -
Gma04g01083 218 SUPERFAMILY Pectin lyase-like 26 201 IPR011050 -
Gma04g01083 218 Pfam Pectinesterase 25 201 IPR000070 GO:0030599|GO:0042545
Gma04g01083 218 PANTHER PECTINESTERASE 18 201 - -
Gma04g01083 218 Gene3D - 17 205 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01083 Gma-Chr4 13989030 13991586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01083 6 201 Carbohydrate Esterase AT5G51490 64.677 9.69e-89 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01083 K01051 - gmx:100806133 317.005