Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01082 ATGGAGAATCTTGGAAAAACATTCCTACTACTCCTATTGTTATCTTCAATATTCTCAATAGCCTCATCAAGAAGAAGACCACCAGCTTCATCCAGCAACATAGATTGGTGGTGCAACCTAACACCACATCCTGAACAATGCAAACAACACCTCAGTACTCAAATGAAGAGCCACCATTTCCAAATCAAGCACAAAACTATCTTCCGGGAAATGCTTCTTCAAAATGCCTTAAATCAAGCCCTCATCATGCAAAAAGAAGCAAATGACAATGACCAAAACAACATGCTAACAAAGAACCACAGAACCGTACATGGTGATTGTTTGAAGCTCTATGGAAAAACCATCTTCCACCTCAACCGCACCCTTGAATGCTTTCATGGGAAGCATAACTGTTCATCGGTTGATGCACAAACATGGCTCAGCACTTCTCTCACAAACATTCAAACATGTCAAGATGGCACGGTTGAACTTGGTGTTGAAGACTTCAAGGTTCCCAACAACAATGTTTCTGAGATGATTAGGAACAGCCTGGCCATCAACATGGACTTCATGAAACATCATGATCACATGGAAGAAAAACCAGAAGATGCGTTTCCAAGTTGGTTTTCAAAGCATGAGAGGAAACTTTTGCAGTCTTCATCGATAAAGGCACATGTTGTGGTGGCCAAAGATGGTTCTGGGAATTTCAAGACTGTGCAAGATGCTCTCAATGCTGCGGCAAAGAGGAAAGTGAAAACAAGATTTGTGATACATGTCAAGAAAGGAGTGTATAGAGAGAATATTGAGGTTTCGGTTCACAATGATAACATCATGCTGGTTGGTGATGGGCTGAGAAATACTATAATCACCAGTGCCCGAAGTGTTCAAGATGGTTATACTACCTATAGTTCTGCAACTGCTGGAATAGACGGCCTCCACTTCATTGCACGCGACATCACCTTCCAAAACACCGCTGGTGTTCACAAGGGTCAAGCTGTGGCACTCCGATCGGCCTCAGACCTCTCCGTCTTCTACCGGTGTGCCTTCATGGGCTACCAAGACACCCTCATGGCTCATGCGCAACGCCAATTTTACCGCCAATGCTACATCTATGGCACTGTTGACTTTATCTTTGGCAATGCCGCAGTGGTGTTCCAAAATTGTTACATTTTCGCAAGAAGACCCTTAGAAGGCCAAGCCAACATGATCACAGCCCAAGGACGAGGCGACCCATTTCAAAACACTGGAATTTCAATTCACAACTCTCAAATTCGAGCAGCTCCAGATCTCAGGCCCGTTGTTGACAAATACAACACTTTCTTGGGTAGGCCTTGGCAACAATACTCTAGAGTCATGGTCATGAAAACGTTCATGGACACCTTGGTTAACCCATTGGGTTGGTCTCCATGGGGTGATTCTGATTTTGCTCAGGACACACTTTATTATGGAGAGTATCAAAATTATGGGCCTGGAGCATCTACAACCAATAGAGTAAAATGGCCTGGTTTTCATGTGATTAATAGCCCAACTGAAGCGTCACAGTTTACTGTGACACACCTTCTTGCTGGCCCAACATGGTTGGGTTCTACAACTGTGCCATTTACCTCTGGCCTTTGA 1596 0.4405 MENLGKTFLLLLLLSSIFSIASSRRRPPASSSNIDWWCNLTPHPEQCKQHLSTQMKSHHFQIKHKTIFREMLLQNALNQALIMQKEANDNDQNNMLTKNHRTVHGDCLKLYGKTIFHLNRTLECFHGKHNCSSVDAQTWLSTSLTNIQTCQDGTVELGVEDFKVPNNNVSEMIRNSLAINMDFMKHHDHMEEKPEDAFPSWFSKHERKLLQSSSIKAHVVVAKDGSGNFKTVQDALNAAAKRKVKTRFVIHVKKGVYRENIEVSVHNDNIMLVGDGLRNTIITSARSVQDGYTTYSSATAGIDGLHFIARDITFQNTAGVHKGQAVALRSASDLSVFYRCAFMGYQDTLMAHAQRQFYRQCYIYGTVDFIFGNAAVVFQNCYIFARRPLEGQANMITAQGRGDPFQNTGISIHNSQIRAAPDLRPVVDKYNTFLGRPWQQYSRVMVMKTFMDTLVNPLGWSPWGDSDFAQDTLYYGEYQNYGPGASTTNRVKWPGFHVINSPTEASQFTVTHLLAGPTWLGSTTVPFTSGL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01082 531 SMART PMEI_2 29 179 IPR006501 GO:0004857
Gma04g01082 531 PANTHER PECTINESTERASE 1 530 - -
Gma04g01082 531 SUPERFAMILY Pectin lyase-like 214 530 IPR011050 -
Gma04g01082 531 ProSitePatterns Pectinesterase signature 2. 363 372 IPR033131 -
Gma04g01082 531 Gene3D - 211 531 IPR012334 -
Gma04g01082 531 CDD PMEI-like_3 36 185 - -
Gma04g01082 531 Pfam Plant invertase/pectin methylesterase inhibitor 33 179 IPR006501 GO:0004857
Gma04g01082 531 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 180 IPR006501 GO:0004857
Gma04g01082 531 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 183 IPR035513 -
Gma04g01082 531 PANTHER PECTINESTERASE 1 530 - -
Gma04g01082 531 Pfam Pectinesterase 218 516 IPR000070 GO:0030599|GO:0042545
Gma04g01082 531 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 180 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01082 Gma-Chr4 13981711 13984264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01082 29 531 Carbohydrate Esterase AT5G51500 54.688 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01082 K01051 - gmx:100806133 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01082 04 13981711 13984264 Gma06g02836 06 52194185 52196319 GST