Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01076 ATGACAACAATATCAAATTGCTCCCTTCTCTTCCTCTTCCTCTTCCTCTCCACCCTCCACATAGCTTCCACCCTCTCAACCCCCACCAACTTCATCAAGTCCTCCTGCAGCACCACCCAGTACCCAGCCCTCTGCATCCAGTCCCTCTCCGTCTACGCCTCCACCATCCAGCAAGACCCCCACGAGCTCGTCCAGACAGCCCTCTCCCTCTCCCTCAACCACACCGAGGCCACCAAAACCTTCGTCGCAAAATGCAACAAATTCAGAGGCCTCAAACCGAGAGAATACGCTGCCTTGAAGGACTGCGCTGAAGAAATCAGTGACAGCGTCGACCGGCTCAGCCGGTCGCTGAAGGAACTCAAATTGTGTAAGGTGAAGGGTGAGGACTTCACGTGGCACATCAGCAACGTTGAGACGTGGGTGAGTTCGGCTTTGACCGATGAGAGCACTTGCGGCGATGGGTTCGCCGGGAAGGCGCTGAATGGGAAGATTAAGGAGGCGATTAGGGCTAGAATGGTCAATGTTGCTCAGGTTACTAGCAATGCTCTCTCGCTTATTAATCAGTATGCTGCACAACACTAG 582 0.5395 MTTISNCSLLFLFLFLSTLHIASTLSTPTNFIKSSCSTTQYPALCIQSLSVYASTIQQDPHELVQTALSLSLNHTEATKTFVAKCNKFRGLKPREYAALKDCAEEISDSVDRLSRSLKELKLCKVKGEDFTWHISNVETWVSSALTDESTCGDGFAGKALNGKIKEAIRARMVNVAQVTSNALSLINQYAAQH 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01076 193 CDD PMEI-like_3 34 191 - -
Gma04g01076 193 Pfam Plant invertase/pectin methylesterase inhibitor 30 185 IPR006501 GO:0004857
Gma04g01076 193 SMART PMEI_2 27 185 IPR006501 GO:0004857
Gma04g01076 193 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 189 IPR035513 -
Gma04g01076 193 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 193 - -
Gma04g01076 193 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 189 IPR035513 -
Gma04g01076 193 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 11 193 - -
Gma04g01076 193 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 189 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01076 Gma-Chr4 13776308 13777424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01076 32 186 Carbohydrate Esterase AT3G14310 31.410 1.42e-21 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01076 - - gmx:100305900 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01076 04 13776308 13777424 Gma06g02839 06 52210257 52216086 GST