Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01069 ATGGTTGGAGGTTTCAAGGACAAATTAAGGGAAGGAGGTTATTATTCCGAGTTTAAGGGAAATTTGCATAATGGGCCTTGTGTAGCAATAAAAATGTTGAGTAAATCGAAAGGTAATGGACACGACTTTGGTAGTGAAGTTGCAACAATTGGAAGAATACATCATGAGAATGTAGTACAACTAATTGGATTTTGTGCTGAGGATTCCAAACGTGCTCTTTTTTATGAATTCATGCCTAATGGATCCCTTGACAAATTTATTTTTTCCAAAGATGGAAGCATACATTTAAGCTATGAGCAAATATATGATATATCAATTGGAGTAGCTCGTGGGATTGCTTGTCTCTATCATGGGTGTGAGTTGTGGATTTTGCATTTTGATATCAAGCCCCACAACATGCTACTCGATGAAAAATTCACCCCAAAGGCATCTGACTTTGGGTTGGCAAAGTTATATCCAATAGATAATAGCATTGTCACTATGACGTTAGCAATAGGGACAATTGGGTATATAGCTCTAGAATTTTATAAAAATAGTGGAGGAATATCCCATAAGGCTGATGTCTACAGCTTGGGGATGCTTTTGATGGAGATGGCAAGCAAGAGGAAAAACCTAGATCCTCATGCAGAGCATTCAAGCCAACTTTACTTTCCATTTTAG 660 0.3758 MVGGFKDKLREGGYYSEFKGNLHNGPCVAIKMLSKSKGNGHDFGSEVATIGRIHHENVVQLIGFCAEDSKRALFYEFMPNGSLDKFIFSKDGSIHLSYEQIYDISIGVARGIACLYHGCELWILHFDIKPHNMLLDEKFTPKASDFGLAKLYPIDNSIVTMTLAIGTIGYIALEFYKNSGGISHKADVYSLGMLLMEMASKRKNLDPHAEHSSQLYFPF 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01069 219 SUPERFAMILY Protein kinase-like (PK-like) 6 208 IPR011009 -
Gma04g01069 219 Gene3D Transferase(Phosphotransferase) domain 1 78 217 - -
Gma04g01069 219 Pfam Protein kinase domain 21 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01069 219 Gene3D Phosphorylase Kinase; domain 1 2 77 - -
Gma04g01069 219 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 1 218 - -
Gma04g01069 219 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Gma04g01069 219 SMART serkin_6 3 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01069 219 ProSiteProfiles Protein kinase domain profile. 3 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01069 219 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 218 IPR045874 GO:0004672
Gma04g01069 219 PIRSF ILK 5 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01069 Gma-Chr4 13195087 13195746 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01069 1 218 Receptor kinase-like Gene Family AT4G18250 49.327 7.45e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gma04g01069 Pkinase 5.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01069 - - gmx:100305367 360.918