Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01066 ATGGAGCAAGCAGATCCATATTCAGAAGATACGATCTCCTGTCCGATTTACATGTTTGATTCAGACAACAGTGTCCTCAAATTGGATTTAACATCCTGTACCAAGATGTTTGACATTGTTGCGCCAGTCAAGGAATTCAACCAACAGGATAATTGGTTGGCTTTGAGATGGTCCAAACCAAATTGTACTGAGTGTGAAGCGAAAGGTAAGAGATGCAAATGGAAGAACAACAACACAGGAGACATTGAATGTTTTGACTGCAAGGGCAAACAAAATGGAATCCAGATTCCCAGATCATTGATTTTTGCTGCTACAGAAGATTACAGGACAGAAAAGCCTGCAAGATTTACCTACGCTGATGTTAAAAGAATCATGGGTGGTTTCAAAGAAAAGTTGGGGGAAGGAGCTCATGGAGCTGTATTCAGAGGAAAACTTTCAAACAAGATTTTGGTGGCTGTGAAGATCCTCAATAATACAGACAAAGAAGGGAATGAGTTAATCAATGAAGTGGAAATTATGGGCAAAATCCACCACATCAACGTTGTTCGTTTGCTTGGCTTCTGTGTAGAAGGACATCATCGTGCTCTTGTCTATTGTCTATTTCCAAAAGGATCCCTACAAAGCTTTATATTTCCACCGGAGGACtgttag 651 0.4009 MEQADPYSEDTISCPIYMFDSDNSVLKLDLTSCTKMFDIVAPVKEFNQQDNWLALRWSKPNCTECEAKGKRCKWKNNNTGDIECFDCKGKQNGIQIPRSLIFAATEDYRTEKPARFTYADVKRIMGGFKEKLGEGAHGAVFRGKLSNKILVAVKILNNTDKEGNELINEVEIMGKIHHINVVRLLGFCVEGHHRALVYCLFPKGSLQSFIFPPEDC 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01066 216 ProSiteProfiles Protein kinase domain profile. 126 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01066 216 ProSitePatterns Protein kinases ATP-binding region signature. 132 154 IPR017441 GO:0005524
Gma04g01066 216 Pfam Protein tyrosine and serine/threonine kinase 128 210 IPR001245 GO:0004672|GO:0006468
Gma04g01066 216 Gene3D Phosphorylase Kinase; domain 1 101 199 - -
Gma04g01066 216 PANTHER RECEPTOR-LIKE KINASE 106 212 - -
Gma04g01066 216 PANTHER RECEPTOR-LIKE KINASE 7 105 - -
Gma04g01066 216 SUPERFAMILY Protein kinase-like (PK-like) 111 211 IPR011009 -
Gma04g01066 216 PANTHER RUST RESISTANCE KINASE LR10-RELATED 106 212 IPR045874 GO:0004672
Gma04g01066 216 PANTHER RUST RESISTANCE KINASE LR10-RELATED 7 105 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01066 Gma-Chr4 13164799 13165637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01066 116 211 Receptor kinase-like Gene Family AT1G66980 47.917 2.05e-24 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gma04g01066 PK_Tyr_Ser-Thr 7.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01066 - - gmx:100813531 313.923