Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01052 ATGGCTGGGATTGATGATAATGTTGGCCTTACTGGTGATTGGGGTCTTGCTAGCCCAAGTCCAAGGACCTTTTTTTCCAGAATGTTCGAAGAAGATAGTGTGACAAGATCAATCTCAGAACATTCTGGAAGTGGTAGAACTGGGGATCTCTTTTCGGGACATCGTGAGCCTAGTGAGACAGGGAAAGAAAACATGAATGATAGGGCACAAGATGGTGATTCTGGAGCCCAATTGACCGATGTGAGTTTTCAGACCGAGCAGAAGTCGAGCTCCCGGGGTGGTCTTGTTGAAAGAATGGCTGCTAGAGCCGGGTTTAATGCTCCAAGGTTGAATACAGAAAGCATTAGATCTACTGACCTTTCGCTTAATCCCGACATTCAGTCTCCGTACTTGACAATCCCGCCTGGTCTCAGTCCTACTACACTTTTAGATTCTCCAGTGTTCCTTGCAAATTCACTGGCACAGCCTTCTCCAACTACCGGAAAGTTCTTGTTCATGGCAAATGGCATCATGAGGAACTCAGAATTATCATCTGATGCTCCAGAAAAATGTAAAGATAATGGCTTTGATGATATCTACACATCATCCTTTGCTTTCAAGCGTGCAACAGATTCAGGCTCTTTTTATCATGGTGCTGGAAGAAAAATGATAAATCCTACTACACTTCCTCAACAGTCCCTTCCTGGTATTGAGGTTTCGGCTCAGTCTGAAAATTCTTTTCAATCTCAAAGTGTTGATGCTGTCAAAGCTCAAACTGAGAACAAAAGTGGTTTTCGTCTTCAGGCCGACTTTGCTGAATCACCTCCTCAAAAAGATAATGGAATTAAGATGTTCTCAGCTGATCAAAGGGCTTTTGATGTTGTTGGCGGTGGCAATGAACATTCTACACCAATTGAAGAGCAAGTAGATGAAGGAGATCAAAGAGGCAATGGAGACTCAATGGCTAGTGGTGTTGGTGGTGCACCATCTGAAGATGGATATAACTGGAGAAAATATGGCCAAAAGCAAGTGAAGGGCAGCGAGTACCCTCGAAGTTACTACAAGTGTACGCATCCAAACTGTCAAGTGAAGAAGAAAGTAGAAAGATCTCATGAGGGCCACATAACTGAGATCATCTACAAGGGAACACACAACCATCCAAAACCTCCTCCAAATCGTCGGTCAGGTATAGGTTTGGTTAACCTTCATACTGACATGCAAGTGGACCACCCTGAACATGTTGAACCACACAACGGTGGTGATGGCGACTTGGGATGGGCTAATGTACAAAAGGGAAACATAGCTGGAGCTGCTAGTTGGAAGCATGACAACCTTGAAGCCGCTTCATCAGCATCCGTTGGCCCTGAATACTGCAACCAGCAGCCCCCCAATTTGCAGACTCAAAATGGTACTCACTTTGATTCAGGAGAGGCAGTGGATGCCTCATCTACTTTTTCTAACGAAGAAGATGAAGACGATCAAGGCACTCATGGTAGTGTATCATTAGGTTATGATGGGGAAGGAGATGAATCTGAGTCTAAGAGAAGGAAACTGGAATCATATGCAGAGTTGAGTGGAGCTACTAGAGCCATTCGTGAGCCTAGAGTTGTTGTACAGACTACCAGCGAAGTAGATATCCTCGATGATGGTTATCGGTGGCGGAAATATGGACAAAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGCACAAATGCAGGGTGCACAGTAAGGAAGCATGTGGAGAGAGCATCACATGACCTTAAATCTGTGATCACTACGTATGAGGGAAAGCACAACCATGATGTTCCAGCTGCTCGTGCCAGCAGTCACGTCAATGCTAATGCTTCCAATGCAGTTCCTGGCCAAGCTTCTCTTCAGACCCATGTTCACAGACCTGAACCATCTGAAGTTCACAACGGCATTGGAAGGCTTGAGAGGCCTTCCCTGGGCTCATTCAACCTACCCGGGAGGCAGCAACTAGGACCTTCCCATGGCTTCTCCTTCGGTATGAACCAATCCATGCTATCAAATCTGGTGATGTCAGGGTTGGGCCATGCGCAAGCAAAGCTTCCTGTCATGCCTGTTCATTCATTCTTGGCAGCGCATcaacaacaacagcaacatcaacaacaacaaaaccaacaacaacGTGCGGCAAATGATTTGGGTTTCATGTTGCCAAAGGGAGAGCCAAATGTGGAGGCTATTCCTGAACGTGGTGGCCTTAACCTGTCAAATGGCTCATCAGTGTACCAAGAAATTATGAGCCGCATGCCTCTTGGACCTCATATGTAA 2286 0.4497 MAGIDDNVGLTGDWGLASPSPRTFFSRMFEEDSVTRSISEHSGSGRTGDLFSGHREPSETGKENMNDRAQDGDSGAQLTDVSFQTEQKSSSRGGLVERMAARAGFNAPRLNTESIRSTDLSLNPDIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFLFMANGIMRNSELSSDAPEKCKDNGFDDIYTSSFAFKRATDSGSFYHGAGRKMINPTTLPQQSLPGIEVSAQSENSFQSQSVDAVKAQTENKSGFRLQADFAESPPQKDNGIKMFSADQRAFDVVGGGNEHSTPIEEQVDEGDQRGNGDSMASGVGGAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGTHNHPKPPPNRRSGIGLVNLHTDMQVDHPEHVEPHNGGDGDLGWANVQKGNIAGAASWKHDNLEAASSASVGPEYCNQQPPNLQTQNGTHFDSGEAVDASSTFSNEEDEDDQGTHGSVSLGYDGEGDESESKRRKLESYAELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNANASNAVPGQASLQTHVHRPEPSEVHNGIGRLERPSLGSFNLPGRQQLGPSHGFSFGMNQSMLSNLVMSGLGHAQAKLPVMPVHSFLAAHQQQQQHQQQQNQQQRAANDLGFMLPKGEPNVEAIPERGGLNLSNGSSVYQEIMSRMPLGPHM 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01052 761 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 106 674 - -
Gma04g01052 761 SMART WRKY_cls 540 599 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g01052 761 SMART WRKY_cls 323 381 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g01052 761 ProSiteProfiles WRKY domain profile. 324 382 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g01052 761 MobiDBLite consensus disorder prediction 70 92 - -
Gma04g01052 761 SUPERFAMILY WRKY DNA-binding domain 532 600 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma04g01052 761 SUPERFAMILY WRKY DNA-binding domain 322 382 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma04g01052 761 MobiDBLite consensus disorder prediction 34 96 - -
Gma04g01052 761 Pfam WRKY DNA -binding domain 324 380 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g01052 761 Pfam WRKY DNA -binding domain 541 597 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g01052 761 MobiDBLite consensus disorder prediction 444 511 - -
Gma04g01052 761 MobiDBLite consensus disorder prediction 623 655 - -
Gma04g01052 761 MobiDBLite consensus disorder prediction 52 69 - -
Gma04g01052 761 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 106 674 IPR044810 GO:0003700
Gma04g01052 761 MobiDBLite consensus disorder prediction 290 330 - -
Gma04g01052 761 Gene3D WRKY domain 527 593 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma04g01052 761 Gene3D WRKY domain 314 383 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma04g01052 761 ProSiteProfiles WRKY domain profile. 535 600 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g01052 761 Coils Coil 698 718 - -
Gma04g01052 761 MobiDBLite consensus disorder prediction 446 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01052 Gma-Chr4 12615531 12620196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01052 1 756 WRKY Transcription Factor Family AT5G56270 48.139 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma04g01052 WRKY 3.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01052 K18835 - gmx:100796545 1521.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01052 04 12615531 12620196 Gma06g02852 06 52343544 52347612 GST