Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01012 ATGGAATCCCAATTAATTGATGGTAATGATGAGATGGAAGTTTCTGGGGATGTGGGTTTGAGTACGTGTGAAGTTCAGATGCATCAAGAAACATATGAAGTGGATCCAAATGAGGGGTGTAGAGTACTAGAGAGTTCTTCTTGGGGAGAGTTGGGTATCTGTGAAGATCATGCTATTCAGGAACCATATGAAGGCATGGAATTTGAATCTGAAGATGCTGCTAAGCTATTCTATGATGAATATGCCCGGCGATTAGGATTTGTCATGCGTGTGATGTCTTGTCGACGCTCAGAAAGGGATGGTAGGATTCTTGCCCGCAGACTTGGATGTAATAAAGAGGGTTATTGTGTCAGCATCCGAGGTAAATTTGCGTCAGTTcgtaaacctagggcaagcacaagggaaggttgtaaggcaatgattcatatcaaatatgataagtctggaaaatgggtgataacaaagtttgtgaaggatcataatcatccattagtagTCTCTCCACGTGAAGCACGCCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAATTAACAGCAGAGCTTCGGCTTAAAAAACGAAGAGCTTTTGCACCAGACATAACCATGCATCATGTCACGGTGTGA 627 0.3493 MESQLIDGNDEMEVSGDVGLSTCEVQMHQETYEVDPNEGCRVLESSSWGELGICEDHAIQEPYEGMEFESEDAAKLFYDEYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFASVRKPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTAELRLKKRRAFAPDITMHHVTV 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01012 208 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 196 - -
Gma04g01012 208 Pfam FAR1 DNA-binding domain 77 165 IPR004330 -
Gma04g01012 208 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 29 196 - -
Gma04g01012 208 Coils Coil 175 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01012 Gma-Chr4 11648238 11652633 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma04g01012 FAR1 1e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01012 - - gmx:100787741 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01012 04 11648238 11652633 Gma06g02873 06 52526325 52530400 GST