Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01008 ATGGCTTCTATACAATGGCCATATGAGCAACTTAAAACAGCTTTCTCTGTTTCTACTTTTCATCAATACCTTTTCCTCTTTCTTCTTGTTATTGTTGTGTTAAAGCTAACAAGAAGACCCAAAATCAAACCCAGTTTCAATCTGCCTCCCTCCCCAAGAAAGCTACCAATCATTGGCAATCTTCATCAACTAAGCAAATTGCCATACCATTCTCTTAGAACCCTCTCACAAAAGCATGGTTCTCTGATGTTGTTGCAGTTGGGGCAGACTCGAGCCTTGGTGGTTTCATCTCCAGACGCGGTCAGGGAAATCATGAAAACTCACGACATAACTTTCTCAAACCGACCCAAAACCACAGCAGCAAAAACCTTGCTGTATGGATGTAATGACATTGGTTTTGCATCCTATGGAGAAAGCTGGAAACACAAAAGAAAAATATGTGTCCTTGAGCTTCTGAGCCCCAAAAGGGTGCAGTCACTTAGTCTCATCAGAGAAGAAGAGGTTGCAGAATTGATTAACAAGATACGTGAAGCAAGCTTGAGTGATGCATCCTCCTCTGTGAATCTAAGTGAGTTGCTTATTGAAACAACAAACAACATCATCTGTAAATGTGCTCTTGGAAAGAAATACAGTACAGAAGATTGTCACAGCAGGATCAAAGAGCTTGCAAAGAGGGCGATGATTCAACTTGGAGTTGTCACTGTGGGGGATCGCTTTCCTTTCTTGGGTTGGGTTGATTTTCTAACTGGCCAAATTCAAGAATTCAAGGCTACTTTTGGAGCATTGGATGCCTTATTTGATCAGGTAATTGCGGAGCATAAGAAGATGCAGAGGGTATCTGATCTCTGCTCCACTGAGAAAGACTTTGTGGATATCCTCATCATGCCTGACTCTGAGCTCACCAAGGATGGCATCAAATCAATTCTATTGGATATGTTTGTAGCAGGAAGTGAAACAACCGCATCAGCACTAGAATGGGCTATGGCAGAGCTCATGAAAAATCCAATGAAATTGAAGAAAGCCCAGGATGAGGTGAGAAAATTTGTAGGGAATAAATCAAAAGTAGAGGAAAATGACATCAATCAAATGGACTACATGAAATGTGTAATCAAAGAAACTCTAAGGTTACATCCACCTGCTCCTCTCTTGGCTCCTAGAGAGACAGCATCTAGTGTGAAACTGGGAGGGTATGATATTCCAGCAAAAACACTGGTATATGTCAATGCATGGGCAATTCAGAGGGACCCTGAGTTTTGGGAAAGACCTGAAGAGTTCATTCCAGAGAGACATGATAACAGCCGGGTTCATTTTAATGGCCAAGACTTGCAATTTATTACATTTGGTTTTGGGAGAAGGGCATGCCCCGGAATGACGTTTGGGCTTGCTTCTGTTGAGTATATTCTGGCCAACCTTCTTTATTGGTTCAATTGGAAGCTGCCTGCAACTCACACATCTGGACAAGACATAGACATGAGTGAAACATATGGCCTAGTTACCTACAAGAAAGAGGCACTTCATCTTAAACCAATCCCCTTTTTCCTTTAA 1545 0.4188 MASIQWPYEQLKTAFSVSTFHQYLFLFLLVIVVLKLTRRPKIKPSFNLPPSPRKLPIIGNLHQLSKLPYHSLRTLSQKHGSLMLLQLGQTRALVVSSPDAVREIMKTHDITFSNRPKTTAAKTLLYGCNDIGFASYGESWKHKRKICVLELLSPKRVQSLSLIREEEVAELINKIREASLSDASSSVNLSELLIETTNNIICKCALGKKYSTEDCHSRIKELAKRAMIQLGVVTVGDRFPFLGWVDFLTGQIQEFKATFGALDALFDQVIAEHKKMQRVSDLCSTEKDFVDILIMPDSELTKDGIKSILLDMFVAGSETTASALEWAMAELMKNPMKLKKAQDEVRKFVGNKSKVEENDINQMDYMKCVIKETLRLHPPAPLLAPRETASSVKLGGYDIPAKTLVYVNAWAIQRDPEFWERPEEFIPERHDNSRVHFNGQDLQFITFGFGRRACPGMTFGLASVEYILANLLYWFNWKLPATHTSGQDIDMSETYGLVTYKKEALHLKPIPFFL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01008 514 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma04g01008 514 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma04g01008 514 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma04g01008 514 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma04g01008 514 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma04g01008 514 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma04g01008 514 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma04g01008 514 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma04g01008 514 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma04g01008 514 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma04g01008 514 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma04g01008 514 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma04g01008 514 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 22 513 - -
Gma04g01008 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Gma04g01008 514 Pfam Cytochrome P450 49 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma04g01008 514 Coils Coil 338 358 - -
Gma04g01008 514 SUPERFAMILY Cytochrome P450 49 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma04g01008 514 Gene3D Cytochrome P450 33 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma04g01008 514 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 22 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01008 Gma-Chr4 11569220 11571199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01008 45 502 Cytochrome P450 AT4G13290 43.791 1.72e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01008 K20617 - gmx:100785621 1012.68