Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00996 ATGTCGTCGTCGAATTCGCCGTGTGCGGCGTGCAAGATTCAGCGTCGGAAGTGCACGCAGGAGTGTGTTTTCGCGCCGTATTTTCCGCCGGACAATCCGCAGCGGTTCGCGTACGTGCACAAGGTGTTCGGGGCGAGCAACGTGGCCAAGCTACTCAACGAGCTTAACGCGGCGCAGCGCGAAGACGCGATTAAGTCCTTAGCATACGAGGCAGAAGCGCGTTTGCGGGACCCGGTGTATGGCTGCGTGGGTCTGATCTCCATCCTCCAGCACAGACTCAAACAGCTGCAGAGCGAACTCCACCGCGCCAAAAAGGAACTCGCTTCCTACGTCGGACCCCAGGCCATGCTTCCTCCTCCGCCTCCTCCCCCTCTGCTGCCACCACAGTCACCCCGCACTTTCTCGCTTTTCCCTTTCAAAACCGCACCCACCAATCAGCAGGATCTTTTCGGCTTCCACGACGATGGCGGTGCTTCGGCTTCCCACGGTGTATTGAACCACCACCTCGCCTTATTCTCGCCTTCCCCCGCAGTTGATCACGCGTTTTCTCACCCGCCGATGCACTCTCTTGCACTTCCGCATCACTCACACCTTACGCGTTCCCCTATGCAACCCAGGCACCAAACTGATCCGGCTTAG 639 0.59 MSSSNSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQREDAIKSLAYEAEARLRDPVYGCVGLISILQHRLKQLQSELHRAKKELASYVGPQAMLPPPPPPPLLPPQSPRTFSLFPFKTAPTNQQDLFGFHDDGGASASHGVLNHHLALFSPSPAVDHAFSHPPMHSLALPHHSHLTRSPMQPRHQTDPA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00996 212 Coils Coil 86 106 - -
Gma04g00996 212 MobiDBLite consensus disorder prediction 183 212 - -
Gma04g00996 212 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Gma04g00996 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 119 - -
Gma04g00996 212 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Gma04g00996 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-RELATED 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00996 Gma-Chr4 11378217 11379594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00996 1 132 AS2 family AT5G66870 78.195 1.06e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma04g00996 LOB 3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00996 - - gmx:100812543 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00996 04 11378217 11379594 Gma06g00950 06 8850626 8852305 GST