LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma04g00982	ATGTTAAAGTGCGTAAAGGAAGCCCACTTGTCACTTGTCTCTTGGAAGGTTCCCGTGGCAGTGGTAAAACTGCACTTTCAGATACCGTGGGTTTCAGCTAAATCAATGATTGGTCTACATGAGAGCACCAAATGTGCACAAATTATTAAGAGCACCCCGTCCCCAAGGAACCCTCGCAAATTGCAGCGGTGCTTCGAGCTCGAGATTAGAGAAGAAAAAGATTCAACCTTTGTGGAAGAGGACGGAAAACCCAGAACGAGAAGACAAATCGCGCGAACTAAGAAGGAGAAACCTAACTCCGTTCCACCTTCAACCCCATCTCCAAAGAGTGAAGAAGAGAATGGTGGTAATCTGGACCATGTTGGACAGGTGGTGAGTGATTTGATCATGTGGAAGGATGCGTCAAAGTCAACCTTTTGGTTTGGTTTTTGTTCTCTTTGTCTCTTGTCTTCGTGCTTTACTCAAGGACTCAACTTTAGGTATGCAACTGCCAGTGCACCTCTGATGGGCTTCTTCTGCTTTGTGGAGGGAGGGACGTCAATAGTGTTATACATTAACTATCTATTCCTCGGAGATTATGTTGATAGGGGCCAACACAGCCTGGAAACTATAAGCCTTCTGCGTGCTCTAAAGAATGACAGCATGAAATGTTTCTCTAGGTCTGATCCTACGGAGAATGACAGTGTTGAATGGCTGCGGCCAAATGCTAGGGGTCCAGGATTAGTCACTTTTGGGAATCAGAAATCTTACAGATTGAAGAGGCAATTGCAATTCAAGGAAATAGTTCTTttgaggagagagcaattgtactttacaagAGATTGGCAGATTATATTGGATTGCCCTGTCCGCATAGCTCGAGGTTGCAAGTATTGTGTTGCAGATCATAGATCTTCTTGCCTAGTCAAAATTAAAGATGACAAACAGCTCTCAAGGGTGTTTCAGAAACCTCCAAGCCTGAACCCAACTGACCCCTCACTTCCAGTTCAGCAGTTTATTCTCTTCACTCTCTTCCTTCACCCTACCTCTCCTGCTATGATCAAACTATTGTGTAGGGTTATGGTGATTGACATGCTTCTCTTCAAGTATATCATGTTTCCCAATGTTGGCAATGGACACTCACCTAGATGCCATGAATCCCTTCACAGTGTGGCGTGGACTAGCTTCTAG	1170	0.4359	MLKCVKEAHLSLVSWKVPVAVVKLHFQIPWVSAKSMIGLHESTKCAQIIKSTPSPRNPRKLQRCFELEIREEKDSTFVEEDGKPRTRRQIARTKKEKPNSVPPSTPSPKSEEENGGNLDHVGQVVSDLIMWKDASKSTFWFGFCSLCLLSSCFTQGLNFRYATASAPLMGFFCFVEGGTSIVLYINYLFLGDYVDRGQHSLETISLLRALKNDSMKCFSRSDPTENDSVEWLRPNARGPGLVTFGNQKSYRLKRQLQFKEIVLLRREQLYFTRDWQIILDCPVRIARGCKYCVADHRSSCLVKIKDDKQLSRVFQKPPSLNPTDPSLPVQQFILFTLFLHPTSPAMIKLLCRVMVIDMLLFKYIMFPNVGNGHSPRCHESLHSVAWTSF	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma04g00982	389	PANTHER	RETICULON-LIKE PROTEIN B17	37	164	IPR044647	-
	Gma04g00982	389	SUPERFAMILY	Metallo-dependent phosphatases	186	211	IPR029052	-
	Gma04g00982	389	MobiDBLite	consensus disorder prediction	76	117	-	-
	Gma04g00982	389	PANTHER	RETICULON-LIKE PROTEIN	37	164	-	-
	Gma04g00982	389	Gene3D	-	183	219	IPR029052	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma04g00982	Gma-Chr4	10760351	10775680	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma04g00982	282	314	MAP Kinase Kinase Kinase	AT4G24480	66.667	3.45e-08	53.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma04g00982	-		-	gmx:100777074	174.096