Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00979 ATGGATACTCTATCATGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCAAAAGGGCTTCACTACCTTCACATTGGGGCTCAGTACATCAGCATTCATATAGATGTGAAAACAACAAACATTCTCTTCGATCAAAACTCGAATGGCAAGGTTTCAGATTTAGGCTTGTCTACAATGGGTGCAACCATGAACACTGTTCATGTTAGTACGGTGGTGAAGGGAAGTTTTGCCTACTTCAATCTTGAATACTTCAGGAGGCAACAATTGACTGAAAAATCTCGTGTACTTTAG 291 0.4089 MDTLSWKQRLEICIGAAKGLHYLHIGAQYISIHIDVKTTNILFDQNSNGKVSDLGLSTMGATMNTVHVSTVVKGSFAYFNLEYFRRQQLTEKSRVL 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00979 96 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00979 96 Pfam Protein tyrosine and serine/threonine kinase 3 95 IPR001245 GO:0004672|GO:0006468
Gma04g00979 96 Gene3D Transferase(Phosphotransferase) domain 1 1 95 - -
Gma04g00979 96 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 95 - -
Gma04g00979 96 PANTHER OS07G0166700 PROTEIN 2 95 IPR045272 GO:0004714|GO:0006468
Gma04g00979 96 SUPERFAMILY Protein kinase-like (PK-like) 3 93 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00979 Gma-Chr4 10750510 10750800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00979 3 95 Receptor kinase-like Gene Family AT3G51550 69.892 3.70e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gma04g00979 PK_Tyr_Ser-Thr 8.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00979 - - gmx:100803463 194.512