Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00939 atgggaagatccccatgctgcgatgagaatggccttaagaaaggtccctggactcccgaagaagatcaaaagctagtccaacatattcagaaacatggccatggtagttggagagccctccctaagcaagctggtctcaacagatgtggaaaaagttgtaggctaaggtggactaactatttaaggcctgatatcaagagggggaagttttctcaagaagaggagcaaacaattctgcatctccattccatccttggaaacaaATGGTCATCAATTGCAACCCACCTTCCAGGCAGGACAGACAATGAGATCAAGAATTTCTGGAACACTCACTTAAAGAAAAAGCTGATTCAGATGGGTTTTGATCCAATGACTCACCAGCCTAGAACTGACCTTGTTTCCACCTTGCCATATCTGCTAGCTTTGGCTAATATGACAGACCTTATGGATCATCATCAGACATTGGATGAACATGCTATGAGGTTGCAAGCAGAGGCAGTCCAGTTGGCAAAGCTTCAATACCTTCATTATCTAATCCAATCCTCAAACTCCTTGAGCACCACCAACTCCTATGACCAAAGTGCCACCACCACAACCAACATGGAACCTACTGCTGCTTTCAGTTTGTTGAACTCAATCTCCAATGTGAAAGAGGATCCAGTCATGTTGCAACCAGATGATACTCCTGCTGCCTCATTTTCTCATGGCATTGCTAGCTCTCAACCACTCCACCACCCAAACGTGCTACCTCACCCTTTAGACCCACAAGTCTCTTTCAGTTCTCAATCATGTTTGAATAGCGAGATGGGTCAAGGTACTAACTTTGCAATCATAAGTCAAGGGGATCACACGGTTGATCATGACTACTCTTCCTGGATTATTCCATCTATTACTCCTCCAAATTCAATAGGGACCTCAGCTAACAATCCAGGAGACGCCAGCAGCAGCACTTCTAGCTATGCAGGAGGACCCTCTTCTTATTGGTCTGAACTACTTTTTGAGGACCCCATCTTGCATGAGCTATCTTAG 1029 0.3333 MGRSPCCDENGLKKGPWTPEEDQKLVQHIQKHGHGSWRALPKQAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSSIATHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSTLPYLLALANMTDLMDHHQTLDEHAMRLQAEAVQLAKLQYLHYLIQSSNSLSTTNSYDQSATTTTNMEPTAAFSLLNSISNVKEDPVMLQPDDTPAASFSHGIASSQPLHHPNVLPHPLDPQVSFSSQSCLNSEMGQGTNFAIISQGDHTVDHDYSSWIIPSITPPNSIGTSANNPGDASSSTSSYAGGPSSYWSELLFEDPILHELS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00939 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gma04g00939 342 CDD SANT 69 112 IPR001005 -
Gma04g00939 342 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Gma04g00939 342 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gma04g00939 342 CDD SANT 16 61 IPR001005 -
Gma04g00939 342 Gene3D - 69 116 - -
Gma04g00939 342 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 298 - -
Gma04g00939 342 SMART sant 66 114 IPR001005 -
Gma04g00939 342 SMART sant 13 63 IPR001005 -
Gma04g00939 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gma04g00939 342 Gene3D - 13 66 - -
Gma04g00939 342 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Gma04g00939 342 MobiDBLite consensus disorder prediction 224 250 - -
Gma04g00939 342 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 1 298 - -
Gma04g00939 342 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gma04g00939 342 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00939 Gma-Chr4 9535799 9537495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00939 1 342 MYB Transcription Factor Family AT1G34670 54.717 2.73e-122 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma04g00939 Myb_DNA-binding 6.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00939 K09422 - gmx:100782792 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00939 04 9535799 9537495 Gma04g00939 04 9535799 9537495 ECH
Gma04g00939 04 9535799 9537495 Gma06g00919 06 8494658 8495988 GST