Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00935 ATGTTTTGTTGTGGGTACCCTTTTTCCTTGGCATCAGAGAAATACTATAATTTTCTTTTCCCCTGTCTTTGCAAAGCTTATGGTTCCCGAAACGGGAAACAGCATGGACTATCCGAGTCCAAGTACAAGTTGAATCCTTTATCAATTTTGATTGGACTGGTTGTGATTCTGGACACAGAAAGTGGGTTTCTTTTCAAATTTGAATTCAAGGATTCATACTCTCAGCTTGTAGCAGCACGTTCTTCGTCCAGCACTGGTAAGGGGAAAAATCATGAAGGCTCAATAAAGTATGGTTTCAGCCTTGTAAAAGGGAAAGCTAATCACCCAATGGAGGATTATCATGTTGCCAAGTTTGCGCAGATACAGGATAATGAATTGGGTTTATTTGCAATTTATGATGGTCACGTGGGTGACCGTGTGCCTGCCTACTTACAGAAACATTTGTTTACCAACATTTTGAGGGAGGAGGAATTTTGGGAGGACCCCACTCTTTCTATCTCGAAAGCATATGAGAGCACAGATCAGGAAATTCTATCACATAGTTCTGATCTTGGGCGTGGTGGATCAACGGCAGTAACTGCTATATTGATCAATGGGCGAAGGTTATGGATAGCTAATGTTGGAGACTCACGAGCTGTTCTTTCAAGAAAAGGTCAAGCTGTACAAATGACTACAGACCATGAGCCTAACACAGAACGAGGCAGCATTGAGACTAGAGGTGGTTTTGTGTCTAACTTGCCAGGTGATGTGCCTAGAGTAAATGGAAAACTTGCTGTTTCTCGTGCATTTGGAGACAAGAGTCTCAAGTCCCATTTGCGATCAGACCCTGATGTACAGAATACTGATGTAGATGTTGATACTGAGATTCTAATCCTTGCAAGTGATGGAATTTGGAAGGTAATGACTAATCAAGAGGCAGTGGATATCGCTAGAAGAACAACGAGAGACCCGCAGAAAGCAGCTAAACAACTAACAGCTGAAGCATTAAAAAGAGATAGTAAAGATGATATATCTTGTGTTGTGGTTAAATTCAGATGA 1038 0.4143 MFCCGYPFSLASEKYYNFLFPCLCKAYGSRNGKQHGLSESKYKLNPLSILIGLVVILDTESGFLFKFEFKDSYSQLVAARSSSSTGKGKNHEGSIKYGFSLVKGKANHPMEDYHVAKFAQIQDNELGLFAIYDGHVGDRVPAYLQKHLFTNILREEEFWEDPTLSISKAYESTDQEILSHSSDLGRGGSTAVTAILINGRRLWIANVGDSRAVLSRKGQAVQMTTDHEPNTERGSIETRGGFVSNLPGDVPRVNGKLAVSRAFGDKSLKSHLRSDPDVQNTDVDVDTEILILASDGIWKVMTNQEAVDIARRTTRDPQKAAKQLTAEALKRDSKDDISCVVVKFR 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00935 345 SMART PP2C_4 92 342 IPR001932 -
Gma04g00935 345 PANTHER PROTEIN PHOSPHATASE 2C 69 344 IPR015655 GO:0004722|GO:0006470
Gma04g00935 345 ProSiteProfiles PPM-type phosphatase domain profile. 96 344 IPR001932 -
Gma04g00935 345 Pfam Protein phosphatase 2C 105 337 IPR001932 -
Gma04g00935 345 SUPERFAMILY PP2C-like 94 344 IPR036457 -
Gma04g00935 345 Gene3D - 75 345 IPR036457 -
Gma04g00935 345 MobiDBLite consensus disorder prediction 218 240 - -
Gma04g00935 345 CDD PP2Cc 95 344 IPR001932 -
Gma04g00935 345 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 69 344 - -
Gma04g00935 345 SMART PP2C_SIG_2 107 344 IPR001932 -
Gma04g00935 345 ProSitePatterns PPM-type phosphatase domain signature. 128 136 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00935 Gma-Chr4 9474831 9477950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00935 66 345 PP2C-type Phosphatase Gene Family AT1G22280 74.126 8.94e-148 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00935 K17506 - gmx:100815565 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00935 04 9474831 9477950 Gma04g00935 04 9474831 9477950 ECH
Gma04g00935 04 9474831 9477950 Gma06g00917 06 8466486 8470129 GST