Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00891 ATGAGGAAGAAAAGGAAAGGAAGCGAGACTGATGGGTCTGCGGATCTGGCTGTTATTTTGGCTCCTAATCATGGCTCTGCTTCATCGAATTTAAAGTCCCATTACTCGCTAGAGGATTGTTGTAGGCTGAAGAAGAGGTGTTGTAAGGAGGAGGATGTTGACACTGAGCCAGCTACATCCTTTAAGAGGAGGCTTGCTGGCATTGCTACTGCCCCGCCTTGCGGGACGTCGTCTTTGATCACGCCGGGGAGAGGGCTCAAGAGGAAGATAGGTTGCATTGATGTCGCTACCCAGATGGGCAGGAAGAAAAAGATCGAGGATGATTATGTGTCTGGGGAGACAATTGGCCAAGGCAAGTTCGGGTCTGTTTGGTTGTGTAGGTCAAAGGTTAGTGGAGCAGAATATGCATGTAAGACCCTGAAGAAGGGGGAGGAAACGGTTCATCGAGAGGTTGAGATCATGCAACACTTGTCTGGACATTCTGGGGTTGTTACACTGCAAGCTGTTTATGAAGAAGCTGAATGCTTTCATCTTGTGATGGAACTTTGCTCTGGGGGACGGCTCATTGATCGGATGGTTGAGGATGGTCCGTATTCGGAACAGAGGGCTGCTAATGTACTCAAGGAAGTGATGTTGGTCATCAAGTATTGTCATGACATGGGAGTTGTGCACAGAGATATCAAACCTGAGAATATTCTGCTCACGGCATCTGGAAAAATTAAGCTTGCAGATTTTGGCTTGGCCATGAGAATTTCAGAAGGTCAGAACTTAACTGGTTTGGCTGGAAGTCCTGCCTATGTTGCCCCAGAAGTATTGTTAGGCAGATACTCTGAGAAGGTGGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGCAGTCTTCCATTTCAAGGAGATTCATTGGAAGCAGTTTTTGAGGCTATTAAGACCGTCAAATTAGATTTCCAAAATGGGATGTGGGAATCAATATCTAAACCTGCACGAGACCTTATTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATATCAGCTGACGAAGTACTTAGACATCCATGGATATTGTTCTACACGGCAAATACATTGAAAATGCTGCCCATCAAAACAAAATTCAAGAACCAAATTGGTGCCTCATGCCAACAGCTTGTTGCGGTACCTGAACCAAGGTTAGGAGGAAACAGGATAGATACTTACTCACTTAGGGAGGGTTCATCCTCTGAAAGTTGCAATTCAGATGATCAGGATGAATGTGTGTTGATTGATGTGCTTGCCTCTGCAATTTCACACGTGAGGATATCTGAACCAAAGAGGAGCAGGGTGTGTGGTCCCACAGGCCCGATAGTTCAACAAGGTTCATCTAACATGAAGCCTAACAACCTCTGTAAAGCATTTTGA 1404 0.458 MRKKRKGSETDGSADLAVILAPNHGSASSNLKSHYSLEDCCRLKKRCCKEEDVDTEPATSFKRRLAGIATAPPCGTSSLITPGRGLKRKIGCIDVATQMGRKKKIEDDYVSGETIGQGKFGSVWLCRSKVSGAEYACKTLKKGEETVHREVEIMQHLSGHSGVVTLQAVYEEAECFHLVMELCSGGRLIDRMVEDGPYSEQRAANVLKEVMLVIKYCHDMGVVHRDIKPENILLTASGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLLGRYSEKVDIWSAGVLLHALLVGSLPFQGDSLEAVFEAIKTVKLDFQNGMWESISKPARDLIGRMLTRDISARISADEVLRHPWILFYTANTLKMLPIKTKFKNQIGASCQQLVAVPEPRLGGNRIDTYSLREGSSSESCNSDDQDECVLIDVLASAISHVRISEPKRSRVCGPTGPIVQQGSSNMKPNNLCKAF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00891 467 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 459 - -
Gma04g00891 467 CDD STKc_CAMK 108 356 - -
Gma04g00891 467 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Gma04g00891 467 Gene3D Transferase(Phosphotransferase) domain 1 100 391 - -
Gma04g00891 467 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 24 459 - -
Gma04g00891 467 SMART serkin_6 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00891 467 Pfam Protein kinase domain 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00891 467 SUPERFAMILY Protein kinase-like (PK-like) 100 376 IPR011009 -
Gma04g00891 467 ProSiteProfiles Protein kinase domain profile. 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00891 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00891 Gma-Chr4 8944166 8946495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00891 101 357 EF-hand Containing Proteins AT4G35310 44.569 1.44e-78 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma04g00891 Pkinase 1.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00891 - - gmx:100812729 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00891 04 8944166 8946495 Gma04g00891 04 8944166 8946495 ECH
Gma04g00891 04 8944166 8946495 Gma06g00880 06 8147692 8151812 GST
Gma14g01786 14 48082080 48085264 Gma04g00891 04 8944166 8946495 PCT
Gma02g02005 02 45531962 45535032 Gma04g00891 04 8944166 8946495 PCT
Gma04g00891 04 8944166 8946495 Gma14g01786 14 48082080 48085264 PCT
Gma04g00891 04 8944166 8946495 Gma02g02005 02 45531962 45535032 PCT