Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00874 ATGCCAGAGAAGAAGAACAAGAAAGTTTCTTTCACCGAAGAAGATGCTGTTACGCTCATGCAGAGGTACGACGCAACTACGGTGTTCACTTTACTTCAGGAAGTGGCGCATTACCCTCACCCCAAGATTGATTGGTGCGAGTTGGTGAAGAAAAGCGCGACTGAGATTTCTAACGCCAGAGAATATCAAATGCTATGGCGGCACTTGGCGTATCGCCATTCTTTGCCTGAAATTTTCGAAGATGGGGATGAACCTTTGCCTCATTTCCAGGATGATGATAGTGACCTAGAGTGTGAGCTAGAAGCATTTCCCCCTGTAAGTGTGGAATGTGCATCAGAGGCTGCTGCATGTGTGAAGGTAATGATTGCTTCTCGTACACTGAGTGAATCTGCCCCTAGTAGCTCAACAATAGAGGCTCCATTGACTATAAATGTTCCAGTTTGCCATTCATCTAGAACTCCTATTGAAAATTCACAGCCCTCTAATTTGATGCAAGGGACAAGCATTATTTTTCCAGTTACCGTTCAGAGACAGACACTGCCAACTATATCATCGACAGATGGTATAGAAACCAAGGGAATAGTTGGTGGTAACATGGCTTCCAAAAGAAAAAGAAAGGCATGGTCAGAAGAAGAGGACATGCAGCTACGAGCTGCTGTTCAAAGATGGGGTGAAGGGAATTGGGCAACCATGGCAAAAGGAGACGACTTTCCTATTAAGAGAAGTGCTACACAGTTGGCTCAGAGGTGGAGCATTTTACGAAAGAAAGATGGTTGTACAAATACAGGAACCATAACCAGCACACAGTATACTACTGCTGAACAGCTGGCAACTCGACACTCTTTATCTTTAGCCCTTGATATGCCATTCAAAAAGTTAACTGCTCCTGGAATGACTGATGTTAAGCCATCCACATCAGTTAAAAATCAAGCGCAGATTAGAAATACTACAGAGAAGGTATCCAGTAGTTTAGTACCACCTCAACAGCCATCTCAACAAGCTTTGTTGGGATCCTCTGATTTGCATGCAAAATCCAAATTAGCAGATGAAAAACCAGTCTTGAAGGGTAATCTAATTTCAGATCATGTGGTAAAATCTGCCACAGCAACTTTGGGGACACGAGTTGATCCCCTTTCAAATACTATATCACAAATtaaagttgctcaagtaaaaaatgctacagataccaagccagcagttagctctttgacaaaaccatccatttctaccaatttgccttctgacccaaagaacaaacatgttacctctttggctgataaaggtgctcaagtaaaacatgccgtggatactaagcctgctgttagctctttgataaagccatccatttctaccaatttgccttctgacccaaagaacaaacatgttacccctttggctgataaagttCCATTGAAGCAAGTTGTTAATCCCACAAAAGAGTTAAAAGTTTCTGATCCCAGCACCACACCAAAAGAGAAGGTACAAGAAAATGAGCCTCCTAAAGTTACCACTGGAAGCCAGGTTGATAGCAGCCTAGAGAAGGGGAGATTTGAAAAAGGTCTAGAGACGAGCACACCTCTTGTTAAAATTAGTTGTGGTGAGGAAGTTTCAAAAGATAAAGCAAATCCAGTAGTAGTGTGTGAAGAGCAAGGAAGTGTTAAGAAGGCCACTGAGAATAACAACATTGACAAGGGGAGTCAAAATTTAGATCATGACAAGAAGATAGATTCTATTAATCAAAGTTCAAATGATCAAAACGCGAATGATAAACATGTAAATTTGCCAGTACAAGATGAACTCAGCCTAAGTGCCAAGGTAGTAAAAAGTGATGGGGAATGTTGA 1842 0.3621 MPEKKNKKVSFTEEDAVTLMQRYDATTVFTLLQEVAHYPHPKIDWCELVKKSATEISNAREYQMLWRHLAYRHSLPEIFEDGDEPLPHFQDDDSDLECELEAFPPVSVECASEAAACVKVMIASRTLSESAPSSSTIEAPLTINVPVCHSSRTPIENSQPSNLMQGTSIIFPVTVQRQTLPTISSTDGIETKGIVGGNMASKRKRKAWSEEEDMQLRAAVQRWGEGNWATMAKGDDFPIKRSATQLAQRWSILRKKDGCTNTGTITSTQYTTAEQLATRHSLSLALDMPFKKLTAPGMTDVKPSTSVKNQAQIRNTTEKVSSSLVPPQQPSQQALLGSSDLHAKSKLADEKPVLKGNLISDHVVKSATATLGTRVDPLSNTISQIKVAQVKNATDTKPAVSSLTKPSISTNLPSDPKNKHVTSLADKGAQVKHAVDTKPAVSSLIKPSISTNLPSDPKNKHVTPLADKVPLKQVVNPTKELKVSDPSTTPKEKVQENEPPKVTTGSQVDSSLEKGRFEKGLETSTPLVKISCGEEVSKDKANPVVVCEEQGSVKKATENNNIDKGSQNLDHDKKIDSINQSSNDQNANDKHVNLPVQDELSLSAKVVKSDGEC 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00874 613 MobiDBLite consensus disorder prediction 316 336 - -
Gma04g00874 613 SMART sant 204 256 IPR001005 -
Gma04g00874 613 ProSiteProfiles Myb-like domain profile. 200 254 IPR001005 -
Gma04g00874 613 MobiDBLite consensus disorder prediction 393 418 - -
Gma04g00874 613 MobiDBLite consensus disorder prediction 557 596 - -
Gma04g00874 613 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 607 - -
Gma04g00874 613 Pfam Myb-like DNA-binding domain 205 250 IPR001005 -
Gma04g00874 613 MobiDBLite consensus disorder prediction 393 421 - -
Gma04g00874 613 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 200 258 IPR017930 -
Gma04g00874 613 CDD SANT_TRF 206 255 - -
Gma04g00874 613 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 607 - -
Gma04g00874 613 MobiDBLite consensus disorder prediction 447 514 - -
Gma04g00874 613 Gene3D - 198 259 - -
Gma04g00874 613 SUPERFAMILY Homeodomain-like 203 256 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00874 Gma-Chr4 8614269 8624052 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma04g00874 Myb_DNA-binding 4.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00874 - - gsj:114409223 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00874 04 8614269 8624052 Gma06g00863 06 7920679 7930963 GST
Gma02g02036 02 45937102 45941652 Gma04g00874 04 8614269 8624052 PCT