Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00869 ATGTCAACACTGAACCATCTTTTTGATCTTCCTGAACAGATATGTTACATACAATGTGGATTCTGTAGCACTATTTTAATGGTAAGTGTCCCATGCAGCAGTTTGTCAATGGTGGTGACAGTAAGATGCGGGCACTGCACAAGCCTCTTTTCTGTTAATATGTCGAAAGCTTCTTTTATCCCTTTCCACCTCTTAGCATCTCTTAGTCATCTTGAGCCAAAAGAAAGTAGTCCAGAAGAAGATGCTAACAAGACTTTGAACAGCCATAGTGCATCCATGATGACCTATTCTGATTGTGAGGAAGAGGATGTAATTCCAATGAGTCATCATGTTGTGAATAAACCGCCAGAGAAGAGACAACGAACACCATCTGCTTATAACTGCTTCATCAAGAAGGAGATTAAAAGGCTAAAGGCTGAAAACCCTGACATGGCCCACAAGGAAGCTTTTAGTACAGCTGCAAAAAATTGGGCCAATTTTCCCCAAACTCAGTGGTGCAGAGGAGATGAAGAGAGCTACAGAAGGTCAATGAAGAAGGTCAAGGATTCCGTGGAAGAAAGGTCCCAAGAAATTCCATCTTGGAAAGGACACAGTTTGAATGAAGAAAGCTCAGCTTATGTGACATAA 627 0.4147 MSTLNHLFDLPEQICYIQCGFCSTILMVSVPCSSLSMVVTVRCGHCTSLFSVNMSKASFIPFHLLASLSHLEPKESSPEEDANKTLNSHSASMMTYSDCEEEDVIPMSHHVVNKPPEKRQRTPSAYNCFIKKEIKRLKAENPDMAHKEAFSTAAKNWANFPQTQWCRGDEESYRRSMKKVKDSVEERSQEIPSWKGHSLNEESSAYVT 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00869 208 MobiDBLite consensus disorder prediction 193 208 - -
Gma04g00869 208 PANTHER AXIAL REGULATOR YABBY 4 1 182 - -
Gma04g00869 208 Gene3D High mobility group box domain 108 196 IPR036910 -
Gma04g00869 208 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 119 195 IPR009071 -
Gma04g00869 208 Pfam YABBY protein 11 164 IPR006780 GO:0007275
Gma04g00869 208 SUPERFAMILY HMG-box 109 163 IPR036910 -
Gma04g00869 208 MobiDBLite consensus disorder prediction 171 192 - -
Gma04g00869 208 MobiDBLite consensus disorder prediction 171 208 - -
Gma04g00869 208 PANTHER PROTEIN YABBY 6-RELATED 1 182 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00869 Gma-Chr4 8593493 8595388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00869 2 161 C2C2-YABBY Transcription Factor Family AT1G23420 65.698 1.44e-65 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Gma04g00869 YABBY 1e-61 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00869 K25796 - gmx:100804172 364.385