Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00864 ATGGTCTGTCCGGGTTCAACGAAATTGTCTCATGACGTTAGGTTCTACAGTAATACTGGATTCTGTAGTTTCCATCATAACCGGATGGGGGTCGGTCGATTACATTTGGTCACCTTAAATCTTTCACCATGTAGTTTGAAGCAAGACTCTTCAGCACTCCATCTTTTAAGTAGACCACATGCCCCAATAAGGCATGTGCCTTCCAGATGTAATGTTTTCATTTGTCAGTCTGTCCTAATACCAGGTGGAGGAAGTGGAACTCCACTGATGAAATCTGCTAGTGTTATTTTAACAAGGTCATATGATGCTCTACAAGGAAACCCTACTTTTCTTCAATTGATCCCAGCTATTGGTATCATTGCCTTTGCTGTTTGCGGTCTTGAGCCACTCCTTCGTCTCAGCAGGGTTTTGTTCCTTCAGAGTACTGACAGTAGTTGGAAGAAAAGTAGTTCGCGATATATCATGACATCTTATTTTCAGCCATTGCTGTTGTGGACTGGGGCAATGCTGGTATGCAGGGCATTAGATCCACTAGTCCTACCATCTGAGTCCAGCCAGGTTGTGAAGCAGCGGCTGCTGAATTTTGTGAGATCTTTGTCAACAGTGATTTCATTTGCCTACTGTTTATCAAGCTTAATTCAACAAGCACAAAAATTCTTTCTGGAGGGAAATGATTCCAGTGGTGCAAGAAATATGGGCCTTGATTTTGCTGGGAAGGCAGTATATACTGCTGTATGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTAGGTTTCTCCACACAGAAGTGGGTAACTGCTGGTGGTTTGGGCACAGTATTGCTCACTCTAGCAGGTCGTGAGATATTTACAAACTTTCTTTCGAGCATAATGATCCATGCAACTCGGCCATTTATTGTGAACGAGTGGATTCAAACGAAGATTGAAGGATATGAGGTTTCTGGCACAGTTGAGCATGTAGGCTGGTGGTCACCAACCATCATCAGAGGTGATGATCGCGAGGCAGTTCATATTCCTAACCACAAGTTTACTGTAAATGTTGTGAGAAATCTGAGCCAGAAATCTCATTGGCGTATCAAGAGTTACATTGCTATCAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCTGATATGCGCAAGGTTTTGTCTAAAAATCCTCAAGTAGAGCAGCAAAAATTACACCGAAGGGTTTTTTTGGAGAATGTCAATCCTGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTGAAAACTTCTCATTTTGAGGAGTATCTCTGTGTTAAGGAGGCAATCCTTTTGGATCTTCTCAGAGTCGTCAGTCATCATCGAGCCAGGCTAGCCACTCCCATCCGCACTGTTCAGAAAATATACAGTGAGGCTGACTCAGAAAATATACCCTTTGGGGACACCATTTTCACTCGATCTAGTGCGGGAAATCGCCCATTCCTACTGATAGAACCACTATATAAAGTTAATGGTGAAGATAAAACTAAGCCTTCAACACGTTCAACTCGTGCAAGTGAGGAAAAAGATTTCAAGATTAATGAAACCATGGCATCTGACACCAAAGAAGATGAGAACTTTGCAGCAACATTAACCTCCTCACCTGATGTAAATTCCAAGGATAAATCCAAGTCACTGTCTGAAGCCCAGCCAAAAAAGGAAAATGCAGTAGATGCAGGAAAGGGACCTACAGTTCCTGTATCGAAAAACCTTGTTCAAAGTGCTGCGCCTGAAACCTCTCCTGTTACTTCCCACGAGATCAATTCTGCAACTTCTTCGCAATCAAAACAAGATGAAGAGAAATCTTCTGTCCCTCTGTCATCAGTTAGGCCATCCTTGGAAGAGAACATTCTACTCGGGGTTGCCATAGAAGGCTCAAAACGTACTCTTCCAATTGAGGAAGAAATGACTCCATCTCCTATGCCTGCAGAGTCACAAGAATTTGCTGTTCAACGGAATGGGGGTGGACCTCCTGCTAGTAAGGATAAGAAGGATGGCCAGTCTTCATTTCCAACTAGTAAACAGAATGACTAA 2046 0.4247 MVCPGSTKLSHDVRFYSNTGFCSFHHNRMGVGRLHLVTLNLSPCSLKQDSSALHLLSRPHAPIRHVPSRCNVFICQSVLIPGGGSGTPLMKSASVILTRSYDALQGNPTFLQLIPAIGIIAFAVCGLEPLLRLSRVLFLQSTDSSWKKSSSRYIMTSYFQPLLLWTGAMLVCRALDPLVLPSESSQVVKQRLLNFVRSLSTVISFAYCLSSLIQQAQKFFLEGNDSSGARNMGLDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKSHWRIKSYIAISHLDVNKINNIVADMRKVLSKNPQVEQQKLHRRVFLENVNPENQALMILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYSEADSENIPFGDTIFTRSSAGNRPFLLIEPLYKVNGEDKTKPSTRSTRASEEKDFKINETMASDTKEDENFAATLTSSPDVNSKDKSKSLSEAQPKKENAVDAGKGPTVPVSKNLVQSAAPETSPVTSHEINSATSSQSKQDEEKSSVPLSSVRPSLEENILLGVAIEGSKRTLPIEEEMTPSPMPAESQEFAVQRNGGGPPASKDKKDGQSSFPTSKQND 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00864 681 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Gma04g00864 681 MobiDBLite consensus disorder prediction 545 559 - -
Gma04g00864 681 MobiDBLite consensus disorder prediction 498 526 - -
Gma04g00864 681 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 674 - -
Gma04g00864 681 MobiDBLite consensus disorder prediction 571 614 - -
Gma04g00864 681 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 674 IPR045042 -
Gma04g00864 681 Gene3D - 195 296 - -
Gma04g00864 681 MobiDBLite consensus disorder prediction 527 544 - -
Gma04g00864 681 Pfam Mechanosensitive ion channel 239 446 IPR006685 GO:0016020|GO:0055085
Gma04g00864 681 Gene3D - 298 353 IPR023408 -
Gma04g00864 681 MobiDBLite consensus disorder prediction 498 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00864 Gma-Chr4 8527328 8533798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00864 9 654 Mechanosensitive Ion Channel Family AT1G58200 56.231 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00864 K22047 - gmx:100796022 1325.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00864 04 8527328 8533798 Gma06g00853 06 7848603 7860480 GST