Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00863 ATGCTAACGTTGTCTCGCGATGTTAGGCTTTATAGTAATAATGGAAGCTGTAGCTTTTGTCGTAGGCAGGATTCTTTAGCACTGCTTTCCAGATTATGGACCCCACTTAGGCCGGTACCTTTGAGATGTAATGCTTTGCCGTGGCAATGTTCCCTAATACCAGCTGGAGGGTGTGAGGCCCCACTTATAGTGGCTTCTGTTTCTCTGTCAAGGTCATATAATGCTATAGCAGGAAAACCAAGTGTGATTCAATTTATCCCTGCCCTTGGTATCATTGGCTTTGCTGTTTTTGGCCTTGAGCCGCTCCTACGCCTGAGCAGGAATCTTTTTCTCCAAGAAAGGACAGATTGGAAGAAAAGTAGTTCACGTTATATTTTGACATCTTATTTTCAACCTTTGCTGTTGTGGACTGGGGTAATGCTCATCTGCAGGTATCTTTCTGGATCAACAAGCCTTTTCCACTGGAAGTTTGTCATGTCCATTGGTGAACACCTTAGCATAAACTGTTTCAGGGATTTGGATCCACTAGTCCTACCATCAGAAACCAGTCAAGCTATTAAGCAACGGCGGCTGAGTTTTGTACGATCGTTGTCAACCGTGCTTACATTTGCTTACTGTTCTTCAAGCTTAATTCGACAAGCACAAAATATTTGTATGGGGACAAATGACTCCAGTGATGAAAGAAATATGAGAATTGATTTTACTGGGAAAGCTGTATATACTGCAATATGGATTGCTGCTTTGACTGCTGGTGGTTTGGGCACAGTATCGATTTCCCTTGCAGGTCGCGAGATATTTACAAACTTCCTTTCGAGTATAATGATTCATGCAACTCGACCATTTGTTGTGAATGAGCGGATTCAAACAAAAATTAAAGGATATGAGGTTACTGGTAAAGTTGAGCATGTAAGCTGGTGGTCACCAACAATAGTGAGAGTTTCTGATTGTGAAGCAGTTCATATTCCTAATCACAATTTGAGTGTAAATGTTGTGAGGAATCTTAGTAAGAAATCTCATTGGGGCATCAAGACTCACCTTGCTATCAGTCACTTGGATGTTAACAAGATTAATAGTATTATAGCTTATATGCGCAAGGTTTTGGCCAAAAATCCTCAAGTAGAGCAGAAAAAATTGCACATAAGGGTTTTTCTAGAGAATATTGATCCAGAAAATCAGGCTCTTATGAAAACCAAATCTTGGTTTCTCAATGGGAGCATAACCATAAGAGGGTGGTCTCAAAGGTTCAGCAACAATGGCGTCGTTCTCGAAGGTTCAACAACCATGACGTTCTCGCAGAGGTGGCCCCAATACGGCGGCGCCACAGTGAAACTCCAACCTCCGACAACCGCGCACCACCTGTCTTCAAACGGAAGAGAAATCCACAGCGGATCAGGTGGCTCCCGCGGCGGAGAAGAGACTGAAAACGCTGTCGTTGATGACAATGGAAGCAAGAAGAGCGATTGA 1464 0.4296 MLTLSRDVRLYSNNGSCSFCRRQDSLALLSRLWTPLRPVPLRCNALPWQCSLIPAGGCEAPLIVASVSLSRSYNAIAGKPSVIQFIPALGIIGFAVFGLEPLLRLSRNLFLQERTDWKKSSSRYILTSYFQPLLLWTGVMLICRYLSGSTSLFHWKFVMSIGEHLSINCFRDLDPLVLPSETSQAIKQRRLSFVRSLSTVLTFAYCSSSLIRQAQNICMGTNDSSDERNMRIDFTGKAVYTAIWIAALTAGGLGTVSISLAGREIFTNFLSSIMIHATRPFVVNERIQTKIKGYEVTGKVEHVSWWSPTIVRVSDCEAVHIPNHNLSVNVVRNLSKKSHWGIKTHLAISHLDVNKINSIIAYMRKVLAKNPQVEQKKLHIRVFLENIDPENQALMKTKSWFLNGSITIRGWSQRFSNNGVVLEGSTTMTFSQRWPQYGGATVKLQPPTTAHHLSSNGREIHSGSGGSRGGEETENAVVDDNGSKKSD 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00863 487 MobiDBLite consensus disorder prediction 473 487 - -
Gma04g00863 487 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 3 146 IPR045042 -
Gma04g00863 487 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 170 403 - -
Gma04g00863 487 Pfam Mechanosensitive ion channel 245 380 IPR006685 GO:0016020|GO:0055085
Gma04g00863 487 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 170 403 IPR045042 -
Gma04g00863 487 MobiDBLite consensus disorder prediction 439 487 - -
Gma04g00863 487 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 3 146 - -
Gma04g00863 487 MobiDBLite consensus disorder prediction 447 462 - -
Gma04g00863 487 SUPERFAMILY Sm-like ribonucleoproteins 265 335 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00863 Gma-Chr4 8499435 8506636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00863 9 405 Mechanosensitive Ion Channel Family AT1G58200 54.067 2.83e-144 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00863 K22047 - gmx:100797302 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00863 04 8499435 8506636 Gma06g00852 06 7841957 7848159 GST