Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00861 ATGAAAACAAGCAGAGCCGAAGCGGAACGCTTGCTAGCGATCGGCGAGAAGCTGCTTCAGAGCCGCGATCTGAGCAGCTCGCGCGACTTCGCCATCCTCGCCCAGGAAGCCGAGCCGCTCCTCGAAGGCTCCGACCAGATCCTGGCCATCGTCGAAGTCCTCCTCGCCGCCGAGAAGCCAATCACCAACGACCACCTCGATTGGTACGCTATTCTCCAGGTCGATCGCACGTGCCAGGACCTCGATCTCATCAAAAAACAGTACCGTAGACTCGGTCTTCTTCTTCACCCCGACAAGAACCCTTTCTCCCTCGCCGACCACGCCTTCAAGCTCGTCTCCGATGCCTGGGCCGTGCTTTCCGACCCGGTCCAGAAAGCGATTTATGACAGGGACGTGGCCGGTTCGGTCGAACCGGAGAGCTTCTGGACCGCGTGTCCGTACTGTTATTTTCTCTACGAGTACCCTGCGGTTTGCGAGGGGTGCTGCCTGAGGTGCCAGAATTGCCAGAGGTCCTTCCATGGGCTTTCGATTCCCTCGCTGCCGCCGCTCGTGCCGGGCCAGGAGGCCTATTATTGTAACTGGGGCTGCTTGCCCATGGGCTTTGTGTTTGGGAATTTGGGCTCCGAtgggcctgggcctgggcctgggcctATGGTCGAGAATGGACCTACTGCGGTGGCGGTTTCGAATGGGGTTAACGTTGCTTCGCGGAAGCGTGGAAGGCCGCGAAAGGGGGTTTGA 741 0.5722 MKTSRAEAERLLAIGEKLLQSRDLSSSRDFAILAQEAEPLLEGSDQILAIVEVLLAAEKPITNDHLDWYAILQVDRTCQDLDLIKKQYRRLGLLLHPDKNPFSLADHAFKLVSDAWAVLSDPVQKAIYDRDVAGSVEPESFWTACPYCYFLYEYPAVCEGCCLRCQNCQRSFHGLSIPSLPPLVPGQEAYYCNWGCLPMGFVFGNLGSDGPGPGPGPMVENGPTAVAVSNGVNVASRKRGRPRKGV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00861 246 Pfam DnaJ domain 67 129 IPR001623 -
Gma04g00861 246 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Gma04g00861 246 SMART dnaj_3 66 124 IPR001623 -
Gma04g00861 246 Gene3D DnaJ domain 56 142 IPR036869 -
Gma04g00861 246 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 241 - -
Gma04g00861 246 CDD DnaJ 67 121 IPR001623 -
Gma04g00861 246 SUPERFAMILY Chaperone J-domain 61 131 IPR036869 -
Gma04g00861 246 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 241 - -
Gma04g00861 246 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gma04g00861 246 PRINTS DnaJ domain signature 88 103 IPR001623 -
Gma04g00861 246 PRINTS DnaJ domain signature 104 124 IPR001623 -
Gma04g00861 246 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00861 Gma-Chr4 8486771 8487999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00861 4 235 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 52.157 1.20e-83 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00861 - - gmx:100802055 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01810 14 48509945 48510970 Gma04g00861 04 8486771 8487999 PCT
Gma02g02029 02 45865481 45867444 Gma04g00861 04 8486771 8487999 PCT