Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00850 ATGAACCCTGGCTTTAATATGGTCTCTAGCAATGAGACAGTGCCTGCTTTCGTGTCCTCTGCACTGCCTCATTTGCAGTTAGGACATTCCTATGAACCCAGTGGTTGGTCTTATTGTTTGCCCCCCTTTCGACAAGGATTTTCCCCTGCTCTGAACTTCAATGCTGAGGGAAAAACCCCTGCTGACCATGTGAAAACTTTTGGGGACAAAATTGGTCCCTATGGTGAATCCAGCTCCCATCAGAAACAATTTCTTGTTATTGACCAGACGGGTGGTCAAACGACTATTGTTTATAGCTCTATGTTTGGGAATCCTGATGAGTGCCTTGCTTCTTGGCATTCAAAACTGCATGGTGCTAACTATTTGAGGGGGAATGAACCTTCTTTCAGAAGAGatttgaatttgaatttgaatttgaacttgaaAGTGAATATGACTGAGCCAACTTTGGCTCATAAAGTGGATGAGAATCTGAAAACCAGCATTGAAAGTGAGATGCATGAAGACACCGAAGAAATTAATGCATTGCTTTACTCGGACAGCTATGGTTATTCTACCCAGGATGAGGATGATGATGATGAAGTTACTAGCACAGGGCACTCTCCGAGTACAATGACCACTCATGATAACTGTGAAGCCTTTAGGGGGGAAACCGCAGAAGAAGTTGCGAGCATTGCCGGGAAAACCAAGAAGAGGAAGCAATTGGATGATTATTACGATGACATACAACTCATTGATACCGGCAGCTCTCAGAATCTGAACAAGTCTTCTGCCACGGGAGATGATGCAGAATCGAGATGTTCTAGTAATAACAACGAAGGATCCTTGTCTGGCAATAAGAAGATGAAAAAGGATAAGATACGCGACGTTCTGAGTATTCTGCGGAGCATAATTCCTGGTGGGAAGGATAAGGATCCGGCCATGCTTCTCGATGATGCCATACATTGCTTGAAAAACTTGAAACACAAGGCTCAAGCGCTCAGACTTGATGCCTTCGCATTGGAAACCTACCATTGCTTGGAGGCTGGACCAACATGCAGGATTAGTAGGTATGGGTAG 1059 0.4353 MNPGFNMVSSNETVPAFVSSALPHLQLGHSYEPSGWSYCLPPFRQGFSPALNFNAEGKTPADHVKTFGDKIGPYGESSSHQKQFLVIDQTGGQTTIVYSSMFGNPDECLASWHSKLHGANYLRGNEPSFRRDLNLNLNLNLKVNMTEPTLAHKVDENLKTSIESEMHEDTEEINALLYSDSYGYSTQDEDDDDEVTSTGHSPSTMTTHDNCEAFRGETAEEVASIAGKTKKRKQLDDYYDDIQLIDTGSSQNLNKSSATGDDAESRCSSNNNEGSLSGNKKMKKDKIRDVLSILRSIIPGGKDKDPAMLLDDAIHCLKNLKHKAQALRLDAFALETYHCLEAGPTCRISRYG 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00850 352 PANTHER TRANSCRIPTION FACTOR BHLH145 1 330 IPR037546 -
Gma04g00850 352 MobiDBLite consensus disorder prediction 249 281 - -
Gma04g00850 352 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 281 335 IPR036638 GO:0046983
Gma04g00850 352 MobiDBLite consensus disorder prediction 182 211 - -
Gma04g00850 352 MobiDBLite consensus disorder prediction 249 277 - -
Gma04g00850 352 PANTHER TRANSCRIPTION FACTOR BHLH145 1 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00850 Gma-Chr4 8345639 8347978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00850 17 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 32.704 2.95e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00850 - - gmx:102668102 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00850 04 8345639 8347978 Gma04g00850 04 8345639 8347978 ECH
Gma04g00850 04 8345639 8347978 Gma06g00838 06 7725331 7727677 GST
Gma14g01793 14 48288303 48289439 Gma04g00850 04 8345639 8347978 PCT
Gma02g02013 02 45633881 45636444 Gma04g00850 04 8345639 8347978 PCT
Gma04g00850 04 8345639 8347978 Gma14g01793 14 48288303 48289439 PCT
Gma04g00850 04 8345639 8347978 Gma02g02013 02 45633881 45636444 PCT