Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00847 ATGGCACCCAGTTTTGACTTTGCTTCTAGCCTCCTTTGCACAGAGGACAGCGCCGTTTTCGACGAGAGCCATAATAACGGGGGTACGATGATGTCGATGATGGGGGTGTACGAGGACACGTGGAGTCCTAGGAAGCGCCACTTTGATGAAGAGCCAGATGAGTTGCCATTGCTGAGTGATGAAAGCTTGGCGATGATGGTGGAAAAAGAGTGCCAACACTGGCCTGGTTTGCGTTGCTTGAATAAGCTTCAAACTGGGGATTTGGACTTCGGTGCCAGAATGGAGGCCGTTGATTGGATTCTCAAGGTCCGATCGCATTTTGGATTTGGTCCTCTCTGTGGATATCTATCTATAAATTACTTGGACCGATTCCTTTGTGCATATGAATTACCAAAGGGAAGAGTTTGGACAATGCAATTATTGGCTGTGGCGTGTTTATCTCTAGCAGCCAAATTAGATGAGACAGAAGTTCCAATCTCTCTTGATTTGCAGGTGGGTGAATCGAAGTTTTTATTTGAGGCTAAAACCATACAGAGAATGGAGCTTCTTGTACTAAGCACATTGAAGTGGAGAATGCAAGCAATTACTCCTTTCACATTCCTTGATTACTTCCTTTGTAAGATCAATGATGATCAAAGTCCATTAAGGTCTTCAATTATGCGATCCATCCAACTCATATCGAGCACTGCAAGAGGGATTGACTTCTTGGAATTCAAACCATCAGAGATTGCAGCAGCAGTGGCTATGTATGTCATGGGGGAAACCCAAACAGTTGACGCTGGGAAAGCAACTTCTTTTCTGATTCAACACGTAGAAAAGGAGAGACTATTGAAGTGTGTCAAAATGATCCAAGAGTTGTCATGCAACAGTGGCTCTGCCAAGGATTCAAGCGCTTCTGTGACTTGCTTACCCCAAAGTCCAATAGGTGTGTTGGATGCTTTGTGCTTCAGCTACAAAAGTGATGACACAAATGCTGGTTCATCTGTTAATTCTTCACACAATAGCCCTGTTGCCAAAAGGAGGAAGTTAAACAAAACCTGTGGAGCTGACCTGTTGTAG 1059 0.4429 MAPSFDFASSLLCTEDSAVFDESHNNGGTMMSMMGVYEDTWSPRKRHFDEEPDELPLLSDESLAMMVEKECQHWPGLRCLNKLQTGDLDFGARMEAVDWILKVRSHFGFGPLCGYLSINYLDRFLCAYELPKGRVWTMQLLAVACLSLAAKLDETEVPISLDLQVGESKFLFEAKTIQRMELLVLSTLKWRMQAITPFTFLDYFLCKINDDQSPLRSSIMRSIQLISSTARGIDFLEFKPSEIAAAVAMYVMGETQTVDAGKATSFLIQHVEKERLLKCVKMIQELSCNSGSAKDSSASVTCLPQSPIGVLDALCFSYKSDDTNAGSSVNSSHNSPVAKRRKLNKTCGADLL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00847 352 PANTHER CYCLINS 1 345 IPR039361 -
Gma04g00847 352 Pfam Cyclin, C-terminal domain 195 294 IPR004367 -
Gma04g00847 352 SUPERFAMILY Cyclin-like 54 192 IPR036915 -
Gma04g00847 352 SMART cyclin_7 98 186 IPR013763 -
Gma04g00847 352 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 345 - -
Gma04g00847 352 CDD CYCLIN 93 185 IPR013763 -
Gma04g00847 352 Pfam Cyclin, N-terminal domain 63 192 IPR006671 -
Gma04g00847 352 Gene3D - 76 193 - -
Gma04g00847 352 SMART Cyclin_C_2 195 306 IPR004367 -
Gma04g00847 352 Gene3D - 63 282 - -
Gma04g00847 352 SUPERFAMILY Cyclin-like 177 286 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00847 Gma-Chr4 8310373 8312987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00847 60 327 Core Cell Cycle Gene Families AT2G22490 47.101 1.05e-78 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00847 K18810 - gmx:100792867 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00847 04 8310373 8312987 Gma04g00847 04 8310373 8312987 ECH
Gma04g00847 04 8310373 8312987 Gma06g00837 06 7708538 7710989 GST