Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00823 ATGTCTCCGCCAGTGCTAAGCATGGGGGAGGAGGAGGGTAAAAGCAATGTCACTTTGTTGGGTTCCTCATCAACCGCCATGGAAAGTGTGTGTCTCAAGAGCTTAGAATTTAAAGAACGCAACTACATGGGTTCATCTGATTGTTCTTCTGTGGACAGCTCGGTTCCGTCCTTCTCAGAAGAGTGTAAAAGTAATCTGAACCTGAAAGCCACTGAACTCAGGCTTGGGCTTCCGGGATCACAGTCTCCTGAAAGAGATTCTGATCTTTGCTTAAGAAGCTCAACTCAATTAGATGAAAAACCTTTGTTTCCGTTGCATCCTTTGACTGATGATCACCATTCTTCAGCCAAAACTGCTGTCTTGGGAAACAAAAGAGGGTTCTCTGATGCCATGAATGGCCTCTCCTCCGAGGGGAAATTCCTAGTTGATTTGGAGGCCGCCAATCCGATACTATCTCCCAGGCCTGCTTGTAACTTGGGATTAAAACCTGGTTCTACCCTTGATAAAGTTGGGGCTCAGCAAACCAAAATGAAAGAAGTAGCAACAACAAAGGGCAACGAAACTAGACCAAGTATTGATGGTTCTGCAAATAATAACAGTGCACCAGCTACCAAGGCTCAGGTTGTGGGGTGGCCTCCTATAAGATCATTCCGGAAAAATTCATTGGCAACTACTTCAAAGAACAATGAAGTAGTTGATGGAAAAAAGGGGGTTGGTGCACTGTTCGTCAAGGTCAGTATGGATGGTGCCCCCTATTTAAGGAAAGTAGACTTGAAGAATTACTCTACATATCCAGAATTATCTTCTGCTCTAGAAAAGATGTTCAGCTGTTTTACTATAAGTAAATGTGGATCTCATGGAATTCTGGGCAGGGAGATGCTGAATGAAACCAAGCTGAAGGACCTTCTTCATGGATCAGAATATGTTCTTACATATGAGGACAAAGATGGCGATTGGATGCTTGTGGGTGATGTTCCCTGGGAGATGTTTATTGAAACATGCAAGAGGCTGAGGATCATGAAGAGTTCTGATGCCATTGGTCTAGCTCCCAGGGCTGTTGAAAAAAGTAAGAGCAGGACCTAG 1083 0.4423 MSPPVLSMGEEEGKSNVTLLGSSSTAMESVCLKSLEFKERNYMGSSDCSSVDSSVPSFSEECKSNLNLKATELRLGLPGSQSPERDSDLCLRSSTQLDEKPLFPLHPLTDDHHSSAKTAVLGNKRGFSDAMNGLSSEGKFLVDLEAANPILSPRPACNLGLKPGSTLDKVGAQQTKMKEVATTKGNETRPSIDGSANNNSAPATKAQVVGWPPIRSFRKNSLATTSKNNEVVDGKKGVGALFVKVSMDGAPYLRKVDLKNYSTYPELSSALEKMFSCFTISKCGSHGILGREMLNETKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIETCKRLRIMKSSDAIGLAPRAVEKSKSRT 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00823 360 MobiDBLite consensus disorder prediction 182 205 - -
Gma04g00823 360 ProSiteProfiles PB1 domain profile. 240 342 IPR000270 GO:0005515
Gma04g00823 360 MobiDBLite consensus disorder prediction 182 207 - -
Gma04g00823 360 PANTHER AUXIN-INDUCED PROTEIN 23 354 - -
Gma04g00823 360 SUPERFAMILY CAD & PB1 domains 240 341 - -
Gma04g00823 360 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 23 354 IPR003311 GO:0005634|GO:0006355
Gma04g00823 360 Pfam AUX/IAA family 71 351 IPR033389 -
Gma04g00823 360 Gene3D - 235 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00823 Gma-Chr4 8012169 8015266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00823 243 345 B3 DNA Binding Superfamily AT2G46530 33.981 6.57e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gma04g00823 AUX_IAA 1.2e-91 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00823 K14484 - gmx:100783314 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00823 04 8012169 8015266 Gma04g00823 04 8012169 8015266 ECH
Gma04g00823 04 8012169 8015266 Gma06g00813 06 7470378 7475367 GST