Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma04g00821 | ATGGGTACTGGTTGGAGAAGAGCCTTCTGCACCCGCGACCCTGCATCTACCATATCGGATAAACATCCCGGAAGCCCAAGCCCGAGCCCAAGAACCTGCACTCGATTGGGTTTTCTCTCTGGTGGTAGCAACCCTTCCACCCCACGCTTGCGTTGCACAACAAAAGCGGAAACTGCTTCTCAAACAGTTACATTAAGTGATAGTCCCAGAGTTCAAAGCAAGAACACCCCCAGAGCAACGAAATCACCATCAGTCTCAAATCCAACTTCTCCACGCTCCCCTCTCAAGCTCTCCCTCTTCAAGAACAGCTTCAAATTCAGGAGTAGCTGTGGAATTTGCTTGAACAGCGTGAAGACAGGACAGGGTACGGCGATATACACAGCGGAATGCGGTCACGCGTTTCATTTCCCGTGCATCGCAGCGCATGTACGCAAGCATGGAAGCTTGGTGTGCCCTGTTTGCAAGGCCACGTGGAAAGACGTGCCTCTACTCGCGGCGCACAAGAACCTCGCGCCAGAATCCGCCGCAAAAGACGACGTCGTCGCCGTCCAGAGGGTCACAGAAAGTCCTTACCCCAATGCCAACGACAAAAAGCCAACAGAGAATAATAATGCCTCCCCCGTTTTCAAAACCTACAACAACCACGTGGAGCAACCATCGAAGCATTCCGATTCAACCAGGTCCTACGACGATGACGAGCCACTCCTCTCTCCCACCTCCGGCGGCCGGATTATTCCAATTCCCGAAGCCGACGAGAATGCCGAAGACGACGAGGATGAAGACCCCGGCGAGTTCCAGGGCTTCTTCGTCAATCCCAAAAACTCATCCTCGTCCAAATCCTACTCCGATTCGTTGCAAACCAGTGACGGTGATTCCAGAACCGTTCAGGTGAAACTGATGCCGGAGTGCGCTGTCATCTCAGCTTCCCGAACACACGAGACCTACGCGTTGGTCTTAAAAGTGAAGGCTCCACCGCCGCCACCTCCTTCTCGGAGCAGCGGCGGGCCGTCACAGCGAGCGCCAATAGATCTGGTCACCGTTCTGGACGTTGGCGGAAGCATGATCGGCGCGAAGCTTCACATGCTAAAGCGCGCGATGCGTTTGGTTATCTCATCCCTTGGCCCCGCCGACAGGCTTTCCATCGTGGCTTTCTCAGCCACCTCCAAACGGCTCTTACCTTTAAGAAGAATGACACGTCAAGGTCAGCGCGTGGCTCGTCGCATCGTTGACCGGCTCATGATCGGTCAAGGCTCCAGCATGGGCGATGCATTGAGGAAAGCCACCAGAGTGTTGGAAGATCGCAGAGAAAGAAACCCGGTGGCCAGCGTCATGCTCTTATCAGACGGTCAAGAAGAGAGGGTTCAAAATCAAAGGGGTAATAATAATAATAATCAGAGGAAGGCATCGAGCCACGTGTCATCGACGCGGTTCGCGCATATCGAGATTCCGGTTCACGCGTTTGGGTTTGGGGCGAAGAGTGGTTACAGCCAGGAACCGGGGGAAGACGCATTTGCCAAGTGCGTGGGGGGACTTTTGAGCGTGGTGGTTCAAGACTTGAGGATTCAAGTAGGGTTTGAATCAGAGTCTTCAGTTGAGATCAGCGCGATTTACTCGTGCAGTGGAAGGCCCACGCTCATGAGCTCAGGGGCGGTGCGGCTCGGCGATTTGTACGCGGAGGAAGAGAGGGAGCTCTTGGTGGAGTTGAGAATTCCGGCGTGGTCTGGAACTGGGGCCCACCACCACGTGATGACGGTACGGTGCCTGTATAAAGACCCTGCCACGCAGGAGATCGTATACGGTAGGGAGCAGGGGCTTCTGGTGCCGCCGCCTCAGAGCGTGCGTTGCTCCGGTACAAGGATTCAGAGGCTCAGGAATCTCTTCATAACCACCAGAGCCATTGCAGAGTCTAGGAGGCTCGTTGAGCATAGCGCTGACTTCACCAGCGCTCATCATTTGCTTGCCTCGGCGCGTGTGCTTCTCATGCAGTCTAATTCGGCTTCGGCTGAGGAGTATGTGCGCGGCTTGGAGGCTGAGCTGGCAGAGCTTCATTGGAGGAGACAGCATGAGCAGATGCAGATTCAGCAGCAGCAAATGATGCAACAGCGGAGAAGAGGGAGCGAGAGAGAGGTGATGGCGCTGGTGGACGAGAATGGCGAGCCGCTTACGCCCACGTCGGCTTGGAGAGCCGCTGAGAAGCTGGCTAAGATGGCAATGATGAAGAAGTCTTTGAATAGAGTCAGCGACTTGCACGGCTTCGAAAACGCTAGGTTTTAA | 2274 | 0.5493 | MGTGWRRAFCTRDPASTISDKHPGSPSPSPRTCTRLGFLSGGSNPSTPRLRCTTKAETASQTVTLSDSPRVQSKNTPRATKSPSVSNPTSPRSPLKLSLFKNSFKFRSSCGICLNSVKTGQGTAIYTAECGHAFHFPCIAAHVRKHGSLVCPVCKATWKDVPLLAAHKNLAPESAAKDDVVAVQRVTESPYPNANDKKPTENNNASPVFKTYNNHVEQPSKHSDSTRSYDDDEPLLSPTSGGRIIPIPEADENAEDDEDEDPGEFQGFFVNPKNSSSSKSYSDSLQTSDGDSRTVQVKLMPECAVISASRTHETYALVLKVKAPPPPPPSRSSGGPSQRAPIDLVTVLDVGGSMIGAKLHMLKRAMRLVISSLGPADRLSIVAFSATSKRLLPLRRMTRQGQRVARRIVDRLMIGQGSSMGDALRKATRVLEDRRERNPVASVMLLSDGQEERVQNQRGNNNNNQRKASSHVSSTRFAHIEIPVHAFGFGAKSGYSQEPGEDAFAKCVGGLLSVVVQDLRIQVGFESESSVEISAIYSCSGRPTLMSSGAVRLGDLYAEEERELLVELRIPAWSGTGAHHHVMTVRCLYKDPATQEIVYGREQGLLVPPPQSVRCSGTRIQRLRNLFITTRAIAESRRLVEHSADFTSAHHLLASARVLLMQSNSASAEEYVRGLEAELAELHWRRQHEQMQIQQQQMMQQRRRGSEREVMALVDENGEPLTPTSAWRAAEKLAKMAMMKKSLNRVSDLHGFENARF | 757 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma04g00821 | 757 | SUPERFAMILY | vWA-like | 341 | 519 | IPR036465 | - | |
Gma04g00821 | 757 | MobiDBLite | consensus disorder prediction | 1 | 94 | - | - | |
Gma04g00821 | 757 | MobiDBLite | consensus disorder prediction | 449 | 472 | - | - | |
Gma04g00821 | 757 | PANTHER | CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR | 3 | 757 | - | - | |
Gma04g00821 | 757 | MobiDBLite | consensus disorder prediction | 18 | 94 | - | - | |
Gma04g00821 | 757 | SUPERFAMILY | RING/U-box | 104 | 160 | - | - | |
Gma04g00821 | 757 | Pfam | RING-like zinc finger | 110 | 139 | IPR001841 | - | |
Gma04g00821 | 757 | ProSiteProfiles | Zinc finger RING-type profile. | 110 | 155 | IPR001841 | - | |
Gma04g00821 | 757 | SMART | VWA_4 | 341 | 529 | IPR002035 | - | |
Gma04g00821 | 757 | MobiDBLite | consensus disorder prediction | 215 | 293 | - | - | |
Gma04g00821 | 757 | Gene3D | von Willebrand factor, type A domain | 343 | 510 | IPR036465 | - | |
Gma04g00821 | 757 | SMART | ring_2 | 110 | 154 | IPR001841 | - | |
Gma04g00821 | 757 | Pfam | von Willebrand factor type A domain | 344 | 450 | IPR002035 | - | |
Gma04g00821 | 757 | ProSiteProfiles | VWFA domain profile. | 343 | 490 | IPR002035 | - | |
Gma04g00821 | 757 | MobiDBLite | consensus disorder prediction | 447 | 472 | - | - | |
Gma04g00821 | 757 | CDD | RING-H2 | 110 | 155 | - | - | |
Gma04g00821 | 757 | CDD | vWA_C3HC4_type | 342 | 516 | - | - | |
Gma04g00821 | 757 | MobiDBLite | consensus disorder prediction | 269 | 293 | - | - | |
Gma04g00821 | 757 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 105 | 230 | IPR013083 | - | |
Gma04g00821 | 757 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE WAV3 | 3 | 757 | - | - | |
Gma04g00821 | 757 | MobiDBLite | consensus disorder prediction | 321 | 340 | - | - | |
Gma04g00821 | 757 | MobiDBLite | consensus disorder prediction | 189 | 208 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma04g00821 | Gma-Chr4 | 7968392 | 7970744 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma04g00821 | 110 | 160 | C3H Transcription Factor Family | AT1G74410 | 41.176 | 4.83e-06 | 46.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma04g00821 | - | - | gmx:100782780 | 1391.33 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma04g00821 | 04 | 7968392 | 7970744 | Gma04g00821 | 04 | 7968392 | 7970744 | ECH |