Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00821 ATGGGTACTGGTTGGAGAAGAGCCTTCTGCACCCGCGACCCTGCATCTACCATATCGGATAAACATCCCGGAAGCCCAAGCCCGAGCCCAAGAACCTGCACTCGATTGGGTTTTCTCTCTGGTGGTAGCAACCCTTCCACCCCACGCTTGCGTTGCACAACAAAAGCGGAAACTGCTTCTCAAACAGTTACATTAAGTGATAGTCCCAGAGTTCAAAGCAAGAACACCCCCAGAGCAACGAAATCACCATCAGTCTCAAATCCAACTTCTCCACGCTCCCCTCTCAAGCTCTCCCTCTTCAAGAACAGCTTCAAATTCAGGAGTAGCTGTGGAATTTGCTTGAACAGCGTGAAGACAGGACAGGGTACGGCGATATACACAGCGGAATGCGGTCACGCGTTTCATTTCCCGTGCATCGCAGCGCATGTACGCAAGCATGGAAGCTTGGTGTGCCCTGTTTGCAAGGCCACGTGGAAAGACGTGCCTCTACTCGCGGCGCACAAGAACCTCGCGCCAGAATCCGCCGCAAAAGACGACGTCGTCGCCGTCCAGAGGGTCACAGAAAGTCCTTACCCCAATGCCAACGACAAAAAGCCAACAGAGAATAATAATGCCTCCCCCGTTTTCAAAACCTACAACAACCACGTGGAGCAACCATCGAAGCATTCCGATTCAACCAGGTCCTACGACGATGACGAGCCACTCCTCTCTCCCACCTCCGGCGGCCGGATTATTCCAATTCCCGAAGCCGACGAGAATGCCGAAGACGACGAGGATGAAGACCCCGGCGAGTTCCAGGGCTTCTTCGTCAATCCCAAAAACTCATCCTCGTCCAAATCCTACTCCGATTCGTTGCAAACCAGTGACGGTGATTCCAGAACCGTTCAGGTGAAACTGATGCCGGAGTGCGCTGTCATCTCAGCTTCCCGAACACACGAGACCTACGCGTTGGTCTTAAAAGTGAAGGCTCCACCGCCGCCACCTCCTTCTCGGAGCAGCGGCGGGCCGTCACAGCGAGCGCCAATAGATCTGGTCACCGTTCTGGACGTTGGCGGAAGCATGATCGGCGCGAAGCTTCACATGCTAAAGCGCGCGATGCGTTTGGTTATCTCATCCCTTGGCCCCGCCGACAGGCTTTCCATCGTGGCTTTCTCAGCCACCTCCAAACGGCTCTTACCTTTAAGAAGAATGACACGTCAAGGTCAGCGCGTGGCTCGTCGCATCGTTGACCGGCTCATGATCGGTCAAGGCTCCAGCATGGGCGATGCATTGAGGAAAGCCACCAGAGTGTTGGAAGATCGCAGAGAAAGAAACCCGGTGGCCAGCGTCATGCTCTTATCAGACGGTCAAGAAGAGAGGGTTCAAAATCAAAGGGGTAATAATAATAATAATCAGAGGAAGGCATCGAGCCACGTGTCATCGACGCGGTTCGCGCATATCGAGATTCCGGTTCACGCGTTTGGGTTTGGGGCGAAGAGTGGTTACAGCCAGGAACCGGGGGAAGACGCATTTGCCAAGTGCGTGGGGGGACTTTTGAGCGTGGTGGTTCAAGACTTGAGGATTCAAGTAGGGTTTGAATCAGAGTCTTCAGTTGAGATCAGCGCGATTTACTCGTGCAGTGGAAGGCCCACGCTCATGAGCTCAGGGGCGGTGCGGCTCGGCGATTTGTACGCGGAGGAAGAGAGGGAGCTCTTGGTGGAGTTGAGAATTCCGGCGTGGTCTGGAACTGGGGCCCACCACCACGTGATGACGGTACGGTGCCTGTATAAAGACCCTGCCACGCAGGAGATCGTATACGGTAGGGAGCAGGGGCTTCTGGTGCCGCCGCCTCAGAGCGTGCGTTGCTCCGGTACAAGGATTCAGAGGCTCAGGAATCTCTTCATAACCACCAGAGCCATTGCAGAGTCTAGGAGGCTCGTTGAGCATAGCGCTGACTTCACCAGCGCTCATCATTTGCTTGCCTCGGCGCGTGTGCTTCTCATGCAGTCTAATTCGGCTTCGGCTGAGGAGTATGTGCGCGGCTTGGAGGCTGAGCTGGCAGAGCTTCATTGGAGGAGACAGCATGAGCAGATGCAGATTCAGCAGCAGCAAATGATGCAACAGCGGAGAAGAGGGAGCGAGAGAGAGGTGATGGCGCTGGTGGACGAGAATGGCGAGCCGCTTACGCCCACGTCGGCTTGGAGAGCCGCTGAGAAGCTGGCTAAGATGGCAATGATGAAGAAGTCTTTGAATAGAGTCAGCGACTTGCACGGCTTCGAAAACGCTAGGTTTTAA 2274 0.5493 MGTGWRRAFCTRDPASTISDKHPGSPSPSPRTCTRLGFLSGGSNPSTPRLRCTTKAETASQTVTLSDSPRVQSKNTPRATKSPSVSNPTSPRSPLKLSLFKNSFKFRSSCGICLNSVKTGQGTAIYTAECGHAFHFPCIAAHVRKHGSLVCPVCKATWKDVPLLAAHKNLAPESAAKDDVVAVQRVTESPYPNANDKKPTENNNASPVFKTYNNHVEQPSKHSDSTRSYDDDEPLLSPTSGGRIIPIPEADENAEDDEDEDPGEFQGFFVNPKNSSSSKSYSDSLQTSDGDSRTVQVKLMPECAVISASRTHETYALVLKVKAPPPPPPSRSSGGPSQRAPIDLVTVLDVGGSMIGAKLHMLKRAMRLVISSLGPADRLSIVAFSATSKRLLPLRRMTRQGQRVARRIVDRLMIGQGSSMGDALRKATRVLEDRRERNPVASVMLLSDGQEERVQNQRGNNNNNQRKASSHVSSTRFAHIEIPVHAFGFGAKSGYSQEPGEDAFAKCVGGLLSVVVQDLRIQVGFESESSVEISAIYSCSGRPTLMSSGAVRLGDLYAEEERELLVELRIPAWSGTGAHHHVMTVRCLYKDPATQEIVYGREQGLLVPPPQSVRCSGTRIQRLRNLFITTRAIAESRRLVEHSADFTSAHHLLASARVLLMQSNSASAEEYVRGLEAELAELHWRRQHEQMQIQQQQMMQQRRRGSEREVMALVDENGEPLTPTSAWRAAEKLAKMAMMKKSLNRVSDLHGFENARF 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00821 757 SUPERFAMILY vWA-like 341 519 IPR036465 -
Gma04g00821 757 MobiDBLite consensus disorder prediction 1 94 - -
Gma04g00821 757 MobiDBLite consensus disorder prediction 449 472 - -
Gma04g00821 757 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 3 757 - -
Gma04g00821 757 MobiDBLite consensus disorder prediction 18 94 - -
Gma04g00821 757 SUPERFAMILY RING/U-box 104 160 - -
Gma04g00821 757 Pfam RING-like zinc finger 110 139 IPR001841 -
Gma04g00821 757 ProSiteProfiles Zinc finger RING-type profile. 110 155 IPR001841 -
Gma04g00821 757 SMART VWA_4 341 529 IPR002035 -
Gma04g00821 757 MobiDBLite consensus disorder prediction 215 293 - -
Gma04g00821 757 Gene3D von Willebrand factor, type A domain 343 510 IPR036465 -
Gma04g00821 757 SMART ring_2 110 154 IPR001841 -
Gma04g00821 757 Pfam von Willebrand factor type A domain 344 450 IPR002035 -
Gma04g00821 757 ProSiteProfiles VWFA domain profile. 343 490 IPR002035 -
Gma04g00821 757 MobiDBLite consensus disorder prediction 447 472 - -
Gma04g00821 757 CDD RING-H2 110 155 - -
Gma04g00821 757 CDD vWA_C3HC4_type 342 516 - -
Gma04g00821 757 MobiDBLite consensus disorder prediction 269 293 - -
Gma04g00821 757 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 230 IPR013083 -
Gma04g00821 757 PANTHER E3 UBIQUITIN-PROTEIN LIGASE WAV3 3 757 - -
Gma04g00821 757 MobiDBLite consensus disorder prediction 321 340 - -
Gma04g00821 757 MobiDBLite consensus disorder prediction 189 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00821 Gma-Chr4 7968392 7970744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00821 110 160 C3H Transcription Factor Family AT1G74410 41.176 4.83e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00821 - - gmx:100782780 1391.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00821 04 7968392 7970744 Gma04g00821 04 7968392 7970744 ECH