Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00782 ATGCCTGAGCTGCGTTCCCGGCCACGCAGAAACCGCCTTGTAGATAACGCAAACGCCGATGAAATCGTGAACGTTCGTGGAACCAGAGCGAGGAAGCTGAAAGACGATCAAGGAGTGAAGGAGAATATTAATAAGAAGAAGGTTTCTGGTAGGGTTTTGGAAGTGGAAGGCATGAATGAGTACGATAGTGGTGGCCGCAGTGCTGATAAGGCTCCCGAAGCTGAAGACGAAGGCACCACACCTCCTATTCCAGAGAAGGTTCAAGTTGGTGGTTCCCCATTGTACAGAGTTGAGAGAAAACTTGGGAAAGGAGGATTTGGGCAGGTTTATGTTGGTCGGCGGCTAGGAGCTGCGAATTCTAATGAACGAGCTGGTGCCGGTGCTGTTGAGATAGCCTTAAAATTTGAGCATAGAAGCAGCAAAGGGTGCAATTATGGACCCCCACATGAGTGGCAGGTTTACAATGCATTAGGTGGTAGTCATGGTGTTCCGCGAGTTCATTATAAGGGACGGCAAGGTGACTACTATATTATGGTCATGGATATACTTGGCCCTAGTCTGTGGGACGTTTGGAATAACAACAATCCTCACATGATGTCTACTGAAATGGTTGCATGTATTGCAATCGAGGCTATCTCCATATTAGAGAAGATGCATTCTAGAGGATATGTGCACGGTGATGTAAAACCTGAGAATTTTTTGCTTGGACCCCCTGGAACTCCTAATGAAAAGAAGTTGTTTCTGGTTGATCTTGGATTAGCAACTCGGTGGCGTGATAGTTCGACTGGCCTTCATGTTGACTATGATCAACGTCCAGATGTTTTTAGGGGCACAGTTCGTTATGCTAGCGTGCATGCCCATCTTGGTAGAACAGGTAGCAGGAGAGATGACTTGGAATCTCTTGCTTACACTCTTGTCTTTCTTCTTCGTGGTCGGCTACCTTGGCAAGGATACCAGGGAGAAAATAAAGGGTTTCTTGTCTGCAAGAAAAAGATGGCCACTTCTCCAGAAACTTTGTGTTGCTTTTGTCCTCAACCATTTCGACAATTTGTTGAATATGTGGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATATATATCCCTTTTCGATGGAATTGTGGGCCCAAATCCAGATATCAGGCCAATAAACACTGAAGGTGCTCAGAAGCTTATATGTCAGGTTGGACATAAGAGGGGGCGATTGACCATAGAAGAAGATGATGATGAACAACCAAATAAGAAGGTTCGAATGGGAATGCCTGCTACACAATGGATTAGTGTTTACAATGCTCGTCGACCAATGAAGCAAAGGTATCATTATAATGTTGCTGATGTGCGGCTGGCCCAACACATTGATAAAGGAAATGAAGATGGTTTATTTATCAGCAGTGTGGCTTCTTGTTCTAATCTTTGGGCACTCATTATGGATGCTGGCACTGGTTTCACCGCACAAGTTTATGAACTGTCTCCCCACTTCCTTCACAAGGAATGGATTATGGAACAGTGGGAGAAGAATTATTACATTAGTGCCATAGCTGGGGCTAATAATGGATCCTCATTGGTTGTAATGTCTAAAGGTACCCAGTACTTACAGCAATCCTATAAAGTCAGTGATTCGTTTCCATTTAAATGGATCAACAAAAAGTGGAGAGAAGGATTTTATGTCACTGCTATGGCCACTGCCGGCTCTAGATGGGCAATTGTTATGTCCCGTGGGGCTGGTTTTTCAGACCAGGTTGTGGAACTTGATTTCTTGTATCCCAGTGAAGGCATTCATCGAAGGTGGGATAGTGGTTATCGCATCACCTCAACTGCTGCAACATGGGACCAAGCTGCTTTTGTTCTTAGTGTCCCAAGAAGAAAACCAGCTGATGAAACTCAGGAGACACTCCGCACATCTGCTTTTCCTGGTACTCATGTCAAGGAAAAATGGGCTAAGAACCTCTATATCGCATCTATTTGTTATGGGAGAACATTCAGCATTAATGTAATGATGACTTTGAAGTTTGAAATGTCCACCTCTATTATTCTAACGACTTCTTCCTGTTTTCAAAGTCTACATGATGGGGTTCTCCTTCTCTTCTTGGGTTCATTAGTGATTTGTGTATTTCCTGAGTTACTTGGACATACAAAGCAGAGTTTGGTTGGTCCTGACAATTATTTTGCTGGAGCAACCCATATGTCAAGGAAATCAGAAGCTGTTCAAGAAACTGGTGCCCCGCGGCTATTCAACAATCTGTAA 2250 0.4378 MPELRSRPRRNRLVDNANADEIVNVRGTRARKLKDDQGVKENINKKKVSGRVLEVEGMNEYDSGGRSADKAPEAEDEGTTPPIPEKVQVGGSPLYRVERKLGKGGFGQVYVGRRLGAANSNERAGAGAVEIALKFEHRSSKGCNYGPPHEWQVYNALGGSHGVPRVHYKGRQGDYYIMVMDILGPSLWDVWNNNNPHMMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPNEKKLFLVDLGLATRWRDSSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLICQVGHKRGRLTIEEDDDEQPNKKVRMGMPATQWISVYNARRPMKQRYHYNVADVRLAQHIDKGNEDGLFISSVASCSNLWALIMDAGTGFTAQVYELSPHFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDSGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPGTHVKEKWAKNLYIASICYGRTFSINVMMTLKFEMSTSIILTTSSCFQSLHDGVLLLFLGSLVICVFPELLGHTKQSLVGPDNYFAGATHMSRKSEAVQETGAPRLFNNL 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00782 749 ProSitePatterns Protein kinases ATP-binding region signature. 101 134 IPR017441 GO:0005524
Gma04g00782 749 SMART serkin_6 95 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00782 749 PANTHER - 51 638 - -
Gma04g00782 749 CDD STKc_CK1 95 372 - -
Gma04g00782 749 MobiDBLite consensus disorder prediction 55 84 - -
Gma04g00782 749 Pfam Protein kinase domain 95 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00782 749 Gene3D Transferase(Phosphotransferase) domain 1 64 413 - -
Gma04g00782 749 PANTHER CASEIN KINASE-RELATED 51 638 - -
Gma04g00782 749 SUPERFAMILY Protein kinase-like (PK-like) 95 376 IPR011009 -
Gma04g00782 749 ProSiteProfiles Protein kinase domain profile. 95 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00782 749 MobiDBLite consensus disorder prediction 66 80 - -
Gma04g00782 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00782 Gma-Chr4 7412194 7429109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00782 177 372 MAP Kinase Kinase Kinase AT5G50180 25.126 1.78e-09 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Gma04g00782 Pkinase 2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00782 - - gmx:100778855 1362.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00782 04 7412194 7429109 Gma04g00782 04 7412194 7429109 ECH
Gma04g00782 04 7412194 7429109 Gma06g00775 06 7027973 7032017 ECH
Gma04g00782 04 7412194 7429109 Gma06g00775 06 7027973 7032017 GST
Gma04g00782 04 7412194 7429109 Gma16g00375 16 3923185 3929950 PCT