Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00759 ATGTGTAACAGTAACACCCTCAAGTTCAACCCCTTTAAGAACCGTTTGCTAATAATGTTCGTGCTGGTTCTTTCTCTCCCCTCCAATGTTCAATCCCAAGCCAAAGATAGTGAAGAAAAGAACCTGCCAGAACTCCCTCAAATGGTTCATCCAAGCAAGGGAATAATAATAGCAGTTCTCTCCACAATGTTTGCCATAGCATTTCTCTTACTTCTCTATGTTAAATTCTGTCGAGTTATCCCTCATGAACTCCTTAGGCAAAACTCAAATCTCCAAAACTTTCAGGGCCTAACTCGACCAAGGTCTAGAGTTTCTGGTATTGACAAACAAGTAATTGAAACACTTCCTTACTTCAAGTTTTCTTCCCTTAAGGGTTCCAAAGAAGGCCTAGAATGCACGGTTTGTCTCTCAAAATTTGAGGACACGGAGACTCTAAGGCTTCTTCCAAAGTGCAAGCACGCTTTCCACATGAATTGCATTGACAACACGAGGTTCGGTTCCTGTCCTTTGGAATCCACGGACCCCAGTGGAAGGTTTCATGGGACTTCGAGTTCTAATGAGAAAGAAAACTCGTTTACGGCACTGAATAATCCTGCGGAGAAGAGGTGCATGTCTGAGATTGCTAATGTTCCAAGTACTACCAGCCACCGCATTAAATGCAGTGAACTGCTACCGTTGGACGCTATAACCACAGTTGCAACTGAACCACCCAACTCTGACAAGGATTTTAGTGACAGAGCCTACATGCCTTCTAACCTGTTTTCCTTCTTCACACTATTGTATAATATTGTTAATGTTAGTTTGAATAAGCCACATACTAATAGAAATCGGAAAGTTCCTCTCGTAGTTGGTCAGCTTGATGATGGAACTACCCAATTGATACTTCGACGTTATATTGTCCTCCACGTTTGTCCTGCACTCTTCTCTAGGCCAAACGACAAACGAGTGGATGGCTAG 957 0.4274 MCNSNTLKFNPFKNRLLIMFVLVLSLPSNVQSQAKDSEEKNLPELPQMVHPSKGIIIAVLSTMFAIAFLLLLYVKFCRVIPHELLRQNSNLQNFQGLTRPRSRVSGIDKQVIETLPYFKFSSLKGSKEGLECTVCLSKFEDTETLRLLPKCKHAFHMNCIDNTRFGSCPLESTDPSGRFHGTSSSNEKENSFTALNNPAEKRCMSEIANVPSTTSHRIKCSELLPLDAITTVATEPPNSDKDFSDRAYMPSNLFSFFTLLYNIVNVSLNKPHTNRNRKVPLVVGQLDDGTTQLILRRYIVLHVCPALFSRPNDKRVDG 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00759 318 Pfam RING-like zinc finger 131 160 IPR001841 -
Gma04g00759 318 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 175 IPR013083 -
Gma04g00759 318 ProSiteProfiles Zinc finger RING-type profile. 132 172 IPR001841 -
Gma04g00759 318 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 25 170 - -
Gma04g00759 318 SUPERFAMILY RING/U-box 111 170 - -
Gma04g00759 318 SMART ring_2 132 171 IPR001841 -
Gma04g00759 318 PANTHER RING-H2 FINGER PROTEIN ATL4J 25 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00759 Gma-Chr4 7135412 7139670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00759 41 170 C3H Transcription Factor Family AT2G20030 48.529 9.57e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00759 K10664 - gsj:114408084 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00759 04 7135412 7139670 Gma06g00749 06 6780885 6782271 GST