Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00754 ATGGAGAGGGTTATCGGCGGGAAGTTTAAGATTGGTCGGAAAATCGGAAGCGGTTCGTTCGGAGAAATTTATATTGCATCAAATATGGATACCTCTGAGATTGTCGCCATCAAGATGGAAAGCAAGAAGACCAAACATCCACAGCTATTGTATGAAGCAAAGTTATATAGTATTCTTCAAGGAGAAAGTGGTATTCCAAGTATGAAGTGGTGTGGCACTGATGGAGACAATAATGTTCTAGTTATTGATCTTCTGGGACGGAGTCTTGAAGACTTTTTTGTCTACTGCGGGAGGAAGTTTTCATTAAAAACAGTTTTGATGTTGGCCGATCAGATGCTGACAAGAATAGAGTGCATGCATTCCAAGGGATTTTTGCATAGAGACATAAAACCAGATAACTTCCTTATGGGTCTTGGGAGGAAATCAAATCAGGTTTATATTATTGATTTCGGACTAGCAAAAAGATATAGGGACCCTAACACAAACAAACATATTCCTTACAGGTCTAATAAAAGCTTAACAGGAACTGCACGTTATGCAAGTTGCAACACTCACATGGGAATTGAGCAAAGTCGTCGGGATGATTTGGAGTCTCTTGGCTATGTTCTTATGTATTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTTTGAAAGCTGCCACCAAAAAGGAAAAATATGACAATATCTGTGAGAAGAAATTATCAACTCCCATTGGGATGCTTTGCAAGTCATATCCTGCGGAGTTTGCTAGTTACTTTCACTATTGCCAATCTTTAACATTTGATCAACACCCAGATTATGGATACTTGAAGCGCTTGTTCCGTGATTTGTTCAAAAGAGAAGCAGGATATGATTCTGACTATATATTTGACTGGACCATCCTAAAATATCAGCAGGCGCAACAGACAAAGAAACAAAATCAATCATCTCCTTCAACTGCAGTGCCTAGCAGTCTAGAGCCAGTAGTTGTGGAAAAACATAAAGGAGTCAATGATTCAGCTCATGTTACTGTAACAAAAATGTTGGCCAATCTCGAACGTCCAAGTGCACCACGTGTGCAGCCTAAGCCATCTAATGTTCAGAATCTGGATGCCAAGAATCATATTGAGAAACATGGTGTGAACAATAGTCCATCTACTTCCTCTGCCACTCCCAAATCCTCTACACTGGATTCCTTCACTACGCCGAATTTCTTCTGCCAAATAGTAGGATTTGAATGCCACTTACAGCTTTTTTTCTTTTTTGCAAATGTCGTGTACATATGTTGTCCACCAGAGGAACATTAG 1284 0.3995 MERVIGGKFKIGRKIGSGSFGEIYIASNMDTSEIVAIKMESKKTKHPQLLYEAKLYSILQGESGIPSMKWCGTDGDNNVLVIDLLGRSLEDFFVYCGRKFSLKTVLMLADQMLTRIECMHSKGFLHRDIKPDNFLMGLGRKSNQVYIIDFGLAKRYRDPNTNKHIPYRSNKSLTGTARYASCNTHMGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAATKKEKYDNICEKKLSTPIGMLCKSYPAEFASYFHYCQSLTFDQHPDYGYLKRLFRDLFKREAGYDSDYIFDWTILKYQQAQQTKKQNQSSPSTAVPSSLEPVVVEKHKGVNDSAHVTVTKMLANLERPSAPRVQPKPSNVQNLDAKNHIEKHGVNNSPSTSSATPKSSTLDSFTTPNFFCQIVGFECHLQLFFFFANVVYICCPPEEH 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00754 427 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 390 - -
Gma04g00754 427 SMART serkin_6 9 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00754 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Gma04g00754 427 PANTHER CASEIN KINASE-RELATED 1 390 - -
Gma04g00754 427 Pfam Protein kinase domain 10 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00754 427 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00754 427 Gene3D Transferase(Phosphotransferase) domain 1 1 339 - -
Gma04g00754 427 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Gma04g00754 427 SUPERFAMILY Protein kinase-like (PK-like) 5 291 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00754 Gma-Chr4 7101821 7107300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00754 9 236 AGC Kinase Gene Family AT3G08720 27.155 4.00e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Gma04g00754 Pkinase 6.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00754 K08960 K08959 gmx:100810377 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00754 04 7101821 7107300 Gma06g00744 06 6752985 6759204 GST