Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00718 ATGCAAAAGGAAAAGGAAGCAATTATCAAGGAGGGGACTACGGAAATAGAAATGGAAGGAACTCGTGCAAAAGAGGGAACCCTACCACCGGGATTTCGATTTCACCCTACTGATGAAGAACTTGTCACTTGCTATCTCGTAAATAAGATATCAGATTCTAATTTTACAGGCAGAGCAATAACTGATGTTGATCTCAACAAATGTGAGCCATGGGAGCTTCCAGGGAAAGCAAAGATGGGAGAAAAAGAATGGTACTTCTTCAGTCTGAGAGACCGTAAATACCCAACGGGTGTGAGAACAAATCGAGCAACTAACACCGGGTATTGGAAGACCACAGGGAAAGACAAGGAGATCTTCAACAGTGAAACATCGGAGTTGATTGGCATGAAGAAGACTTTAGTTTTCTACAAAGGCAGAGCTCCCAGAGGAGAAAAAAGCAACTGGGTCATGCATGAATACCGCATTCACTCAAAATCCAGCTATAGAACTAACAGGCAGGATGAATGGGTGGTTTGCCGGGTATTCAAGAAGAGCGGTGGTGCAAAGAAGTACCATTCCTCCAACCATGCAAGAACAGTGAATCCATACAGCTTGGAAATTGGACCAAGTATCATGCCACCACCAATGATGCAACTGGGAGATCCTAGTGCTCATTTCCTTTATGGAAGAAACTACATGAACAGTGCTGAGTTAGCTGAACTTGCTAGGGTTTTAAGAGGGGGTGGATCAACCAGTAGTGTCAACCTCCCAATTCAGTCTCAGTTGAGCTACCCTACATCATCATCAGCTGGAGGAGGAGGATTCATCATTTCAGGGCTCAATTTGAACCTTGGAGGAGGAGCAACAGCCACAACACAACCCATTTTAAGGCCAATGCAACCTTCTCCTCCTGTCCATACAATGGCCCAAGTACTTGATGTGAATTCCAGCATGATGACAACCAGTTCTCTTGGTGCTGAGAATAATGTTGGTTATGGAACAGAAGTGAGTAACAATATGAATTCTCATGGGAATAGGTATATGGGCATGGACCACCATTGCATGGATCTTGACAACTATTGGCCTTCCTACTAA 1074 0.4413 MQKEKEAIIKEGTTEIEMEGTRAKEGTLPPGFRFHPTDEELVTCYLVNKISDSNFTGRAITDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSETSELIGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSSYRTNRQDEWVVCRVFKKSGGAKKYHSSNHARTVNPYSLEIGPSIMPPPMMQLGDPSAHFLYGRNYMNSAELAELARVLRGGGSTSSVNLPIQSQLSYPTSSSAGGGGFIISGLNLNLGGGATATTQPILRPMQPSPPVHTMAQVLDVNSSMMTTSSLGAENNVGYGTEVSNNMNSHGNRYMGMDHHCMDLDNYWPSY 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00718 357 Gene3D NAC domain 37 180 IPR036093 GO:0003677|GO:0006355
Gma04g00718 357 SUPERFAMILY NAC domain 23 177 IPR036093 GO:0003677|GO:0006355
Gma04g00718 357 Pfam No apical meristem (NAM) protein 29 155 IPR003441 GO:0003677|GO:0006355
Gma04g00718 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 354 - -
Gma04g00718 357 ProSiteProfiles NAC domain profile. 28 177 IPR003441 GO:0003677|GO:0006355
Gma04g00718 357 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00718 Gma-Chr4 6689182 6692078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00718 22 357 NAC Transcription Factor Family AT2G24430 52.101 3.45e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma04g00718 NAM 3.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00718 - - gmx:100805060 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00718 04 6689182 6692078 Gma04g00718 04 6689182 6692078 ECH
Gma04g00718 04 6689182 6692078 Gma06g00706 06 6417433 6420223 GST