Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00697 ATGAGTATCAAAATTGCCTGGCTTGGAAAGTTGAAGGTTTTCCCAGAAAATCACGAGCCACGGAAGAAGAGAATTCTTGATCCTGGAAGTGATGTTATTTTGGAGTGGAACCGGGCTTTCCTGTTTTCTTGCATTCTAGCACTGTTTGTTGATCCACTCTTTTTCTACCTCCCCTCAGTAGCAAATGACGGCAAAGTCATCGTGACGGCCTATGTGTCACCGAATTCAAGGGTTTTTGCTAGGGGTGAGCTTGCTATGGATCCTAGGCTGATTGCAAGGCGGTATTTGAGATCAGAGTTCTTCCTAGATCTTGTTGCTACACTGCCTCTTCCCCAGATTGTGATTTGGTTTATTATGCCAGCAATTAGAAGCTCCCATGCTGATCATACCAACAATGCAATATCTTGGGCTGGAGCTGCTTACAATCTTCTACTATACATGTTAGCTAGTCATGTCTTGGGTGCATCCGGGTACTTGTTATCAATTGAAAGGCATGCTACTTGCCGGAAATCTGAATGCAGAAATGAAAGCCTCCCTGTGAAATTGGAAAATAATGTTGTGTCCTCTGTGTTTAAAGAGAAGTATCTCTATTGTCTGTGGTGGGGCTTGCAGAACTTAAGTTCCTATGGCCAGAGTTTGACAACAAGCACGTTCGTTTGGGAAACTGCATTTGCAATACTCATAGCTATTCTGGGTCTTGTTCTGTTTGCCCACTTAATTGGTAACATGCAGACCTATTTGCAATCCATTACTGTGAGGCTTGAAGAGTGGAGGCTCAAGCGACGTGACACTGAAGAGTGGATGAGCCATCGCCAGCTCCCACAAAATCTCAGAGAGCGAGTCCGAAGATTTGTTCAGTACAAGTGGCTTGCAACTCGTGGGGTTGATGAAGAAACAATCCTACGTGGCCTTCCTACTGACCTACGTAGAGATATCCAATGCCACCTTTGCCTGGACCTCGTTCGACGTGTTCCCTTTTTCTCACAAATGGATGATCAACTACTGGATGCCATATGTGAGAGATTGGTATCATCCTTGAGTACTCAAGGCACATACATAGTGAGAGAAGGAGACCCGGTTACAGAGATGCATTTTATCATCAGAGGGAAACTTGAAAGCTCAACCACAAATGGAGGCAGAACTGGTTTCTTCAACTCCATTACCTTGAGGCCTGGTGATTTCTGTGGAGAAGAGCTACTTGCTTGGGCATTGCTTCCAATATCCACTCTCAACTTGCCTTCGTCTACAAGAACTGTTAAGCCCTTGTGGAAGTGGAAGCCTTTGCACTAA 1290 0.4488 MSIKIAWLGKLKVFPENHEPRKKRILDPGSDVILEWNRAFLFSCILALFVDPLFFYLPSVANDGKVIVTAYVSPNSRVFARGELAMDPRLIARRYLRSEFFLDLVATLPLPQIVIWFIMPAIRSSHADHTNNAISWAGAAYNLLLYMLASHVLGASGYLLSIERHATCRKSECRNESLPVKLENNVVSSVFKEKYLYCLWWGLQNLSSYGQSLTTSTFVWETAFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMSHRQLPQNLRERVRRFVQYKWLATRGVDEETILRGLPTDLRRDIQCHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMHFIIRGKLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPISTLNLPSSTRTVKPLWKWKPLH 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00697 429 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 63 - -
Gma04g00697 429 Pfam Ion transport protein 36 253 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma04g00697 429 SUPERFAMILY Voltage-gated potassium channels 30 248 - -
Gma04g00697 429 Gene3D - 123 252 - -
Gma04g00697 429 Gene3D Helix hairpin bin 253 317 - -
Gma04g00697 429 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 181 422 - -
Gma04g00697 429 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 135 177 - -
Gma04g00697 429 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 69 134 - -
Gma04g00697 429 CDD CAP_ED 326 400 IPR000595 -
Gma04g00697 429 ProSiteProfiles cAMP/cGMP binding motif profile. 326 400 IPR000595 -
Gma04g00697 429 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 6 63 - -
Gma04g00697 429 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 181 422 - -
Gma04g00697 429 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 69 134 - -
Gma04g00697 429 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 135 177 - -
Gma04g00697 429 SUPERFAMILY cAMP-binding domain-like 256 400 IPR018490 -
Gma04g00697 429 Pfam Cyclic nucleotide-binding domain 349 398 IPR000595 -
Gma04g00697 429 Gene3D Jelly Rolls 324 426 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00697 Gma-Chr4 6504721 6508212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00697 3 422 Ion Channels AT2G24610 63.068 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00697 K05391 - gmx:100801879 738.799