Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma04g00694 | ATGGCAGTGGAGCTGATGGGGTTCCCCCAAATGGGCGAACAGAAGGCAATTGAAGAAGCAGCCGCCGAAGGCCTCAAGGGCATGGAACACCTCCTCTGTCTCCTCTCCCATCAACCTTCCCACCTCCGCACTCACCACACCGACGCCACCGTTTCCAACTTCAAAAAACTCATCTCCCTTCTCAACCGCCGCACCGGCCATGCCCGTTTCCGCCGCGCACCCCTCCCTTCCACTTCCAACTCTCTCGCCCCATCCCCTCCACTGGCTAACCCGGTCACCTTCGCCCCTTCGCAGTCACAGAGTCTAACCCTCGATTTCTCAAAACCTAACATGTTCAACACCACCAACGCCAAATCCATGGACCTCGAGTTCTCTAAAGAAACCTTCAGCGTCTCCTCCAACTCCTCCTTCATGTCCTCCGCTATCACCGGCGACGGTAGCGTCTCCAATGGCAAACTAGGATCCTCCCTCTTCCTCACTCCTCCGCCAGTCTCCGCCGGAAAACCTCCTCTCTCGTTTGCTCCGATCAAGAAGAGGTGCCACGACCACCGCGAGCACTCCGACGACATCTCCGGGAAACTCTCCGGCTCCAGCAAGTGCCACTGCATCAAGAGAAGGAAGAATCGTGTGAAGAAAACGGTTAGAGTTCCGGCGATTAGTTCGAAGGTCGCCGATATTCCGCCGGATGAGTACTCGTGGAGGAAGTACGGACAGAAGCCGATCAAGGGATCACCGTACCCGAGGGGGTATTACAAGTGCAGTACCGTGAGAGGGTGCCCGGCGAGGAAACACGTGGAGCGTGCTTCGGACGATCCGACGATGTTGATTGTAACGTACGAGGGGGAGCACCGACACTCGATTCAGaCCGCGATGCAGGAGAACATTTCCGGGGGAGTGGGTTTGGTATTCGAGTCAACGTGA | 921 | 0.5689 | MAVELMGFPQMGEQKAIEEAAAEGLKGMEHLLCLLSHQPSHLRTHHTDATVSNFKKLISLLNRRTGHARFRRAPLPSTSNSLAPSPPLANPVTFAPSQSQSLTLDFSKPNMFNTTNAKSMDLEFSKETFSVSSNSSFMSSAITGDGSVSNGKLGSSLFLTPPPVSAGKPPLSFAPIKKRCHDHREHSDDISGKLSGSSKCHCIKRRKNRVKKTVRVPAISSKVADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERASDDPTMLIVTYEGEHRHSIQTAMQENISGGVGLVFEST | 306 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma04g00694 | 306 | Gene3D | WRKY domain | 212 | 287 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gma04g00694 | 306 | SMART | WRKY_cls | 227 | 287 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma04g00694 | 306 | Pfam | Plant zinc cluster domain | 177 | 225 | IPR018872 | - | |
Gma04g00694 | 306 | ProSiteProfiles | WRKY domain profile. | 222 | 288 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma04g00694 | 306 | Pfam | WRKY DNA -binding domain | 229 | 285 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma04g00694 | 306 | PANTHER | WRKY PROTEIN | 10 | 305 | - | - | |
Gma04g00694 | 306 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 10 | 305 | IPR044810 | GO:0003700 | |
Gma04g00694 | 306 | SUPERFAMILY | WRKY DNA-binding domain | 225 | 287 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma04g00694 | Gma-Chr4 | 6471614 | 6473815 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma04g00694 | 1 | 305 | WRKY Transcription Factor Family | AT2G24570 | 60.429 | 3.73e-115 | 333 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gma04g00694 | WRKY | 5.1e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma04g00694 | - | - | gmx:100127394 | 593.964 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma04g00694 | 04 | 6471614 | 6473815 | Gma06g00685 | 06 | 6233062 | 6242747 | GST |