Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00659 ATGGGTTTGGATTACTACAATGTGCTGAAGGTTAACAGAAATGCTTCGGAGGATGATCTGAAGAAAGCGTACAGAAAGTTGGCCATGAAATGGCACCCTGACAAGAACCCCACCAACAAAAAAGAAGCAGAAGCAACTTTCAAACAGATCTCTGAGGCTTACGAAGCAAGAAACCTTTTCCCATCCGACCCACAAAAGAGGGTGGTTTATGATCAGTATGGAGAGGAAGGGCTGAAAGATAGGCCACCACCAGGTAATGAACCGGCATCAAGTGGGTTTAATCCCAGAAACGCAGAGGATATATTTGCAGAATTCTTTGGAAGTAGCCCTTTTGGATTTGGATCATCAGGGCCAGGAAGGTCCAAGAGGTTCCCATCTGATGGAGGGGCAACAACATTTGGTGGATTCAGTGCAACTGACAATAATTTTCGAACGTATAGTACAGGAACAGGACGGGGGAACATGCCAAAGAAGCCACCACCAGTGGAGACCAAACTAGCTTGTAGTTTGGAGGAGTTATACTCTGGATCTACCAGGAAAATGAAGATCTCAAGGAGTGTCGTGGATGTTAACGGGCAAGCAATTCCGGAAACAGAGATACTAACCATTGATGTGAAGCCGGGTTGGAAGAAAGGGACAAAGATTACATTCCCGGGAAAAGGGAATCAGCAACCAAATCAACTGGCAGCAGACCTTGTGTTTGTGATTGATGAGAAGCCTCATGATTTGTTCAAGAGAGATTGCAATGACCTCATTGTGAGCAAAAGGGTGTCACTGGCAGAGGCCATTGGAGGAACCACAATAAATCTCACGGCACTTGATGGACGCAGTTTGAGTATCCCAGTCAGTGACATAGTGAGCCCTGGTTATGAGATGAGTGTAGCAAATGAAGGGATGCCAATAACAAAGGAGCCTGGTCATAGGGGTGATTTGAGGATCAAATTTGATGTGAAGTTTCCAACAAGGTTGACCCATGAGCAACGAGCAGGACTCAAACGAGCACTGGGAAGTTGA 1014 0.4586 MGLDYYNVLKVNRNASEDDLKKAYRKLAMKWHPDKNPTNKKEAEATFKQISEAYEARNLFPSDPQKRVVYDQYGEEGLKDRPPPGNEPASSGFNPRNAEDIFAEFFGSSPFGFGSSGPGRSKRFPSDGGATTFGGFSATDNNFRTYSTGTGRGNMPKKPPPVETKLACSLEELYSGSTRKMKISRSVVDVNGQAIPETEILTIDVKPGWKKGTKITFPGKGNQQPNQLAADLVFVIDEKPHDLFKRDCNDLIVSKRVSLAEAIGGTTINLTALDGRSLSIPVSDIVSPGYEMSVANEGMPITKEPGHRGDLRIKFDVKFPTRLTHEQRAGLKRALGS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00659 337 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 336 - -
Gma04g00659 337 Gene3D - 161 239 - -
Gma04g00659 337 Pfam DnaJ domain 4 71 IPR001623 -
Gma04g00659 337 MobiDBLite consensus disorder prediction 116 142 - -
Gma04g00659 337 SUPERFAMILY HSP40/DnaJ peptide-binding domain 161 242 IPR008971 GO:0006457|GO:0051082
Gma04g00659 337 SMART dnaj_3 3 66 IPR001623 -
Gma04g00659 337 Pfam DnaJ C terminal domain 162 320 IPR002939 -
Gma04g00659 337 CDD DnaJ 4 55 IPR001623 -
Gma04g00659 337 PRINTS DnaJ domain signature 6 24 IPR001623 -
Gma04g00659 337 PRINTS DnaJ domain signature 24 39 IPR001623 -
Gma04g00659 337 PRINTS DnaJ domain signature 42 62 IPR001623 -
Gma04g00659 337 PRINTS DnaJ domain signature 66 85 IPR001623 -
Gma04g00659 337 SUPERFAMILY Chaperone J-domain 4 115 IPR036869 -
Gma04g00659 337 SUPERFAMILY HSP40/DnaJ peptide-binding domain 244 329 IPR008971 GO:0006457|GO:0051082
Gma04g00659 337 Gene3D - 241 321 - -
Gma04g00659 337 CDD DnaJ_C 160 323 - -
Gma04g00659 337 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 336 - -
Gma04g00659 337 MobiDBLite consensus disorder prediction 75 94 - -
Gma04g00659 337 ProSiteProfiles dnaJ domain profile. 4 74 IPR001623 -
Gma04g00659 337 Gene3D DnaJ domain 3 116 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00659 Gma-Chr4 6098200 6100023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00659 5 73 C2H2 Transcription Factor Family AT1G74250 38.356 4.20e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00659 K09510 - gmx:100796426 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00659 04 6098200 6100023 Gma06g00652 06 5905435 5907542 GST