Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00655 ATGGATAAAGTAAATAGAGTTTGTGCCAAAGATGAAGAGCGTCCACTCCGAATCACCAGAGCAAGAGCTAGAGCCTTGAGAGGGATTACTCCCTACTCAAGACCCTCCTTAAAAAATGAGCAGAAAAACGTGCTTCGAGCTAATTCCAAAAGAGCAGCAAGTTCTGGAAACAAAACTTTTGCGGTTGTTCCTGCTGTTGTCCAGCAAAAGGGAAGGGCAGTGCTTTCAGATATATCAAACATGTGTGCAAAACCACATGATAAGTGTACTAAGGCATCAAAATTTCAGGCCAAAGGAGTTTGTACAAAGAAAAACACCAAGCTTGCAGCCTCAAGTGTTTCCACTGACGTTTCATCCTCACATGACGATGTTAGAGCAAAGTTAGCTGAAGAATTATCCACAATAAAGATGGTTGAATCAAATGACACCTTAAGAGAAGGTGTAACAGCAGACACCTCACTTTCAATGCAAAACTCTGTGAAATCTGATGAACTCCGGAACTCTCCAAACAAAGACATAGATATAATTTGTGAGAAGCTGGGAGCCTCAGACTCCCTGACTATTGTGGACATTGATTCAGAGTTAAAGGATCCTCAACTGTGGAGTTTTTATGCCCCTGACATATACAGCAATATTCGAGTCACAGAGCTTCAAAGGAAACCATTGACCAACTACATGGACAAGTTGCAGAAAGATATTAATCCAAGCATGCGTGGAATTCTGGTTGATTGGCTTGTGGAGGTTTCTGAGGAATACAAGTTGGTTCCAGACACTCTTTACCTGACCGTGAACCTCATTGATCGGTATCTCTCAACAAGACTCATTCAGAAGCAAAAGCTCCAGTTGCTCGGTGTTACTTGCATGTTGATTGCATCAAAATATGAAGAGATGTGTGCACCTCGAGTGGAGGAATTTTGCTTCATCACAGATAATACATACACAAAAGAAGAGGTATTGAAAATGGAGAGAGAAGTACTGAATCTTGTGCATTTTCAGTTATCTGTCCCCACAATCAAAACTTTTCTCAGGTATTTTCATCTTGTTATACAGGCTCCTTATGTTGAACTGGAATTCCTGGCAAATTATTTAGCAGAGCTTGCTCTTGTTGAATGCAGCTTCTTCCAGTTTCTACCTTCCCTTATAGCTGCATCTGCTGTGTTCCTTGCCAAATGGACCCTGAATGAGTCAGAACATCCATGGAATCCAACTCTGGAGCACTATACAAAATACAAAGCTTCAGACCTCAAAACTGTTGTTCTTGCACTGCAAGATCTGCAACTTAATACCAAAGGATGCTTCCTGAATGCTGTCCGCGAGAAGTATAAGCAACAGAAGTTCAATTGTGTGGCAAACTTGTCTCCAAAATCGGTGCAGTCACTCTTCCAGAACCAAGTGTCTCTTTGTTTTGCAAAGGGAAAACTGTTGCGGGATGATACAGTTCAAAGAGTGAGTTGA 1455 0.4151 MDKVNRVCAKDEERPLRITRARARALRGITPYSRPSLKNEQKNVLRANSKRAASSGNKTFAVVPAVVQQKGRAVLSDISNMCAKPHDKCTKASKFQAKGVCTKKNTKLAASSVSTDVSSSHDDVRAKLAEELSTIKMVESNDTLREGVTADTSLSMQNSVKSDELRNSPNKDIDIICEKLGASDSLTIVDIDSELKDPQLWSFYAPDIYSNIRVTELQRKPLTNYMDKLQKDINPSMRGILVDWLVEVSEEYKLVPDTLYLTVNLIDRYLSTRLIQKQKLQLLGVTCMLIASKYEEMCAPRVEEFCFITDNTYTKEEVLKMEREVLNLVHFQLSVPTIKTFLRYFHLVIQAPYVELEFLANYLAELALVECSFFQFLPSLIAASAVFLAKWTLNESEHPWNPTLEHYTKYKASDLKTVVLALQDLQLNTKGCFLNAVREKYKQQKFNCVANLSPKSVQSLFQNQVSLCFAKGKLLRDDTVQRVS 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00655 484 Pfam Cyclin, C-terminal domain 336 454 IPR004367 -
Gma04g00655 484 PANTHER CYCLINS 50 461 IPR039361 -
Gma04g00655 484 SMART Cyclin_C_2 336 455 IPR004367 -
Gma04g00655 484 CDD CYCLIN 334 422 IPR013763 -
Gma04g00655 484 SUPERFAMILY Cyclin-like 335 454 IPR036915 -
Gma04g00655 484 CDD CYCLIN 237 326 IPR013763 -
Gma04g00655 484 Pfam Cyclin, N-terminal domain 207 333 IPR006671 -
Gma04g00655 484 PIRSF Cyclin_A_B_D_E 31 466 IPR039361 -
Gma04g00655 484 Gene3D - 221 334 - -
Gma04g00655 484 ProSitePatterns Cyclins signature. 238 269 IPR006671 -
Gma04g00655 484 PANTHER CYCLIN-A2-4 50 461 - -
Gma04g00655 484 SUPERFAMILY Cyclin-like 196 333 IPR036915 -
Gma04g00655 484 SMART cyclin_7 243 327 IPR013763 -
Gma04g00655 484 SMART cyclin_7 340 424 IPR013763 -
Gma04g00655 484 Gene3D - 207 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00655 Gma-Chr4 6052030 6062268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00655 16 461 Core Cell Cycle Gene Families AT5G25380 52.993 2.36e-148 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00655 K06627 - gmx:547780 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00655 04 6052030 6062268 Gma06g00648 06 5873339 5878539 GST
Gma17g01942 17 34494048 34501005 Gma04g00655 04 6052030 6062268 PCT
Gma14g01148 14 17874124 17879979 Gma04g00655 04 6052030 6062268 PCT
Gma04g00655 04 6052030 6062268 Gma17g01942 17 34494048 34501005 PCT
Gma04g00655 04 6052030 6062268 Gma14g01148 14 17874124 17879979 PCT